Detailed information NTG0191745

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: CA926_RS07730
• Genome accession: NZ_CP021265
• Coordinates: 1716819..1717829 (-)
• Length: 336 a.a.
• NCBI ID: WP_027227075.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. fraseri strain Los Angeles
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1711819..1722829

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CA926_RS07700	-	1712158..1712991 (-)	834	WP_028378934.1	S1/P1 nuclease	-
CA926_RS07705	tolB	1712994..1714253 (-)	1260	WP_028378935.1	Tol-Pal system beta propeller repeat protein TolB	-
CA926_RS07710	tolA	1714259..1715257 (-)	999	WP_027227071.1	cell envelope integrity protein TolA	-
CA926_RS07715	tolR	1715254..1715709 (-)	456	WP_028379056.1	protein TolR	-
CA926_RS07720	tolQ	1715718..1716395 (-)	678	WP_080272004.1	protein TolQ	-
CA926_RS07725	ybgC	1716420..1716815 (-)	396	WP_027227074.1	tol-pal system-associated acyl-CoA thioesterase	-
CA926_RS07730	ruvB	1716819..1717829 (-)	1011	WP_027227075.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
CA926_RS07735	-	1717965..1718528 (-)	564	WP_028378937.1	sigma-70 family RNA polymerase sigma factor	-
CA926_RS07745	-	1719013..1719252 (-)	240	WP_027221767.1	succinate dehydrogenase assembly factor 2	-
CA926_RS07750	-	1719378..1720367 (+)	990	WP_027227078.1	glycine cleavage system protein T	-
CA926_RS07755	-	1720399..1720947 (-)	549	WP_028378938.1	cytochrome b	-

Sequence

Protein

• Length: 336 a.a.
• Molecular weight: 37100.67 Da
• Isoelectric Point: 5.4546

>NTDB_id=191745 CA926_RS07730 WP_027227075.1 1716819..1717829(-) (ruvB) [Legionella pneumophila subsp. fraseri strain Los Angeles]
MLESDRLISSQSIVSEEAIDRAIRPLSLSEYVGQDSVSSQMQIFINAAKKRNDPLDHVLIFGPPGLGKTTLANIIAHEMG
VNIRQTSGPVIERAGDIAAILTNLQQNDVLFIDEIHRLSPVIEEILYPAMEDYKLDIMIGEGPAARSIKLELPPFTLIGA
TTRAGLLTSPLRDRFGIVQRLEYYSVDSLTRIVARSAHLLGVPTKPEGAREIALRSRGTPRIANRLLRRVRDYSEVKGNG
IITVDMAQQALEMLEVDQHGFDLMDRKLLLAVIEHFNGGPVGIDSIAAAIGEEKGTIEDVLEPFLIQQGFLMRTPRGRIA
TSKAYQHFGFSAIEQE

Nucleotide

• Length: 1011 bp

>NTDB_id=191745 CA926_RS07730 WP_027227075.1 1716819..1717829(-) (ruvB) [Legionella pneumophila subsp. fraseri strain Los Angeles]
ATGCTCGAAAGTGATCGCCTAATCAGTAGTCAAAGTATTGTCTCGGAAGAAGCCATAGATAGAGCTATCAGGCCGCTTAG
TTTGAGTGAGTACGTAGGACAAGACTCTGTAAGTTCACAGATGCAGATATTTATCAATGCGGCAAAAAAGCGAAATGATC
CTTTAGACCATGTTCTTATTTTTGGCCCACCTGGACTTGGCAAAACTACTTTAGCGAATATCATAGCTCACGAAATGGGA
GTTAATATCAGACAAACTTCTGGGCCAGTGATTGAGCGAGCCGGTGATATTGCAGCTATATTGACGAATTTACAACAAAA
TGATGTACTATTTATTGACGAAATTCACAGATTAAGTCCTGTTATAGAAGAAATTCTTTATCCAGCTATGGAAGATTATA
AGTTGGATATCATGATAGGAGAGGGGCCCGCAGCACGATCTATTAAATTAGAGTTACCTCCTTTTACATTAATTGGAGCT
ACAACAAGAGCAGGATTACTTACCTCGCCATTAAGGGATAGATTTGGTATAGTGCAACGATTGGAGTATTATTCTGTTGA
TTCGCTTACCCGGATTGTAGCACGCTCTGCTCATTTGCTTGGTGTCCCTACAAAACCTGAAGGAGCCAGAGAAATTGCAT
TACGTTCCAGAGGAACACCACGCATCGCCAATCGCCTGTTAAGAAGAGTAAGGGATTATTCTGAAGTGAAAGGAAATGGC
ATCATTACTGTTGATATGGCTCAACAAGCATTGGAAATGCTTGAAGTGGATCAACATGGATTCGATTTAATGGATAGAAA
ATTATTGTTAGCAGTGATAGAGCATTTCAATGGCGGTCCAGTTGGTATAGATAGCATTGCAGCTGCTATTGGTGAAGAAA
AAGGAACTATAGAGGACGTTTTAGAGCCATTTTTAATACAACAAGGCTTTCTAATGCGCACTCCTCGCGGTAGAATAGCT
ACTTCGAAAGCTTATCAACATTTTGGTTTTAGTGCGATCGAACAGGAATAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (259-328)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (23-181)

• RuvB AAA lid domain (AAA_lid_4) (184-257)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.976	97.619	0.595
ruvB	Streptococcus pneumoniae TIGR4	57.273	98.214	0.563
ruvB	Streptococcus pneumoniae R6	57.273	98.214	0.563
ruvB	Streptococcus pneumoniae D39	57.273	98.214	0.563
ruvB	Helicobacter pylori 26695	53.106	95.833	0.509
ruvB	Synechocystis sp. PCC 6803	53.016	93.75	0.497