Detailed information NTG0190753

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: B9N48_RS06535
• Genome accession: NZ_CP021169
• Coordinates: 1243651..1244787 (+)
• Length: 378 a.a.
• NCBI ID: WP_015252291.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain TLO3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1238651..1249787

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B9N48_RS06515	uxaA	1239100..1240593 (+)	1494	WP_086343734.1	altronate dehydratase family protein	-
B9N48_RS06520	yjnA	1240632..1241396 (-)	765	WP_014476525.1	sulfite exporter TauE/SafE family protein	-
B9N48_RS06525	bstD	1241621..1242085 (-)	465	WP_014479541.1	DinB family protein	-
B9N48_RS06530	yjoB	1242234..1243505 (+)	1272	WP_003245490.1	ATPase YjoB	-
B9N48_RS06535	rapC	1243651..1244787 (+)	1137	WP_015252291.1	response regulator aspartate phosphatase RapA	Regulator
B9N48_RS06540	phrA	1244777..1244911 (+)	135	WP_003245487.1	phosphatase RapA inhibitor PhrA	-
B9N48_RS06545	yjpA	1244941..1245198 (-)	258	WP_041344765.1	YciI family protein	-
B9N48_RS06550	xlyB	1245319..1246272 (+)	954	WP_017695144.1	N-acetylmuramoyl-L-alanine amidase	-
B9N48_RS06555	yjqA	1246312..1246689 (-)	378	WP_014479546.1	PH domain-containing protein	-
B9N48_RS06560	pghB	1246795..1247397 (+)	603	WP_041344770.1	poly-gamma-glutamate hydrolase family protein	-
B9N48_RS06565	xpdC	1247474..1248310 (+)	837	WP_003245071.1	manganese catalase family protein	-
B9N48_RS06570	xkdA	1248354..1248950 (-)	597	WP_015715727.1	ImmA/IrrE family metallo-endopeptidase	-
B9N48_RS06575	xre	1249113..1249454 (-)	342	WP_017695142.1	HTH-type transcriptional regulator Xre	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 45046.23 Da
• Isoelectric Point: 4.7218

>NTDB_id=190753 B9N48_RS06535 WP_015252291.1 1243651..1244787(+) (rapC) [Bacillus subtilis strain TLO3]
MRMKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPFGEDTSQLE
FSELLEDIEGNQYKLTGLLEYYFNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQK
AAEYFEKSVSICKSEKFDNLPHSIYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELFVELFQFLHALYGKNIDTESVS
HTFQFLEEHMLYPYIEELAHDAAQFYIENGQPEKALSFYEKMVHAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=190753 B9N48_RS06535 WP_015252291.1 1243651..1244787(+) (rapC) [Bacillus subtilis strain TLO3]
TTGAGGATGAAGCAGACGATTCCGTCCTCTTATGTCGGGCTTAAAATTAATGAATGGTATACTCATATCCGGCAGTTCCA
CGTCGCTGAAGCCGAACGGGTCAAGCTCGAAGTAGAAAGAGAAATTGAGGATATGGAAGAAGACCAAGATTTGCTGCTGT
ATTATTCTTTAATGGAGTTCAGGCATCGTGTCATGCTGGATTACATTAAGCCTTTTGGAGAGGACACGTCGCAGCTAGAG
TTTTCAGAATTATTAGAAGACATCGAAGGGAATCAGTACAAGCTGACAGGGCTTCTCGAATATTACTTTAATTTTTTTCG
AGGAATGTATGAATTTAAGCAGAAAATGTTTGTCAGTGCCATGATGTACTATAAACGGGCAGAAAAGAATCTTGCCCTCG
TCTCGGATGATATTGAGAAAGCCGAGTTTGCTTTTAAAATGGCCGAGATTTTTTACAATTTAAAACAAACCTATGTTTCG
ATGAGCTACGCCGTTCAGGCATTAGAAACATACCAAATGTATGAAACGTACACCGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGTAATTATGATGATATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTGGCTTTAGATCTTGCAAAGA
AAGAAGGCAATCCCCGCCTGATCAGTTCCGCCCTATATAATCTCGGAAACTGCTATGAGAAAATGGGTGAACTGCAAAAG
GCAGCCGAATACTTTGAGAAATCTGTTTCTATTTGCAAGTCGGAAAAGTTCGATAATCTTCCGCATTCTATCTACTCTTT
AACACAAGTTCTGTATAAACAAAAAAATGACGCCGAAGCGCAAAAAAAGTATCGTGAAGGATTGGAAATCGCCCGTCAAT
ACAGTGATGAATTATTTGTGGAGCTTTTTCAATTTTTACATGCGTTATACGGAAAAAACATTGACACAGAATCGGTCTCA
CACACCTTTCAATTTCTTGAAGAACATATGCTGTATCCTTATATTGAAGAGCTGGCGCATGATGCTGCCCAATTCTATAT
AGAAAACGGACAGCCCGAAAAAGCACTTTCATTTTATGAGAAAATGGTGCACGCACAAAAACAAATCCAGAGAGGAGATT
GTTTATATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-67)

• Tetratricopeptide repeat (TPR_12) (221-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.947	99.471	0.447
rapF	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.418