Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   A6L49_RS07355 Genome accession   NZ_CP016646
Coordinates   1397458..1398072 (+) Length   204 a.a.
NCBI ID   WP_002258537.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M22819     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1392458..1403072
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L49_RS07335 (A6L49_07335) - 1392538..1393047 (+) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  A6L49_RS07340 (A6L49_07340) - 1394298..1394885 (-) 588 WP_002258535.1 superoxide dismutase -
  A6L49_RS07345 (A6L49_07345) dnaB 1395048..1396454 (+) 1407 WP_002220671.1 replicative DNA helicase -
  A6L49_RS07350 (A6L49_07350) pilH 1396763..1397428 (+) 666 WP_002258536.1 GspH/FimT family pseudopilin Machinery gene
  A6L49_RS07355 (A6L49_07355) pilV 1397458..1398072 (+) 615 WP_002258537.1 type IV pilus modification protein PilV Machinery gene
  A6L49_RS07360 (A6L49_07360) pilJ 1398069..1399010 (+) 942 WP_002258538.1 PilW family protein Machinery gene
  A6L49_RS07365 (A6L49_07365) pilK 1398989..1399585 (+) 597 WP_002258539.1 pilus assembly PilX family protein Machinery gene
  A6L49_RS14655 (A6L49_07370) - 1399590..1400064 (+) 475 Protein_1371 PilX family type IV pilin -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 22147.10 Da        Isoelectric Point: 4.9586

>NTDB_id=190039 A6L49_RS07355 WP_002258537.1 1397458..1398072(+) (pilV) [Neisseria meningitidis strain M22819]
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHHTLSVVDGDFQVDAIKTKTQLAEAQLKRFSYELKNALPDAAAIYYAICKDSSGVAPTLSAGSTFSSNCDASA
NGDTLIKVLWVNDSAGDSDIARTNLETNGNNIVYTYQARVGGRE

Nucleotide


Download         Length: 615 bp        

>NTDB_id=190039 A6L49_RS07355 WP_002258537.1 1397458..1398072(+) (pilV) [Neisseria meningitidis strain M22819]
ATGAAGAATAATGATTGCTTCCGCCTGAAAAACCCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCTGTTCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCAGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCATCATACACTATCAGTTGTGGATGGCGATTTTCAGGTTGATGCCATAAAAACTAAGAC
GCAGTTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCATCTATTACG
CCATCTGCAAGGATTCGTCGGGTGTTGCGCCGACATTGTCCGCCGGCAGTACTTTTTCTTCAAATTGCGATGCTAGTGCA
AATGGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATCGCCCGTACGAATCTTGAGAC
GAACGGCAACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

90.338

100

0.917
  pilI Neisseria gonorrhoeae MS11

83.333

100

0.833
  pilV Neisseria gonorrhoeae MS11

83.333

100

0.833

Multiple sequence alignment