Detailed information NTG0189638

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: A6B39_RS11200
• Genome accession: NZ_CP016606
• Coordinates: 2321871..2323049 (+)
• Length: 392 a.a.
• NCBI ID: WP_176671080.1
• Uniprot ID: -
• Organism: Mannheimia granulomatis strain BJ1680.3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2316871..2328049

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6B39_RS11165 (A6B39_11080)	srlB	2317038..2317403 (+)	366	WP_176671073.1	PTS glucitol/sorbitol transporter subunit IIA	-
A6B39_RS11170 (A6B39_11085)	srlD	2317451..2318239 (+)	789	WP_176671074.1	sorbitol-6-phosphate dehydrogenase	-
A6B39_RS11175 (A6B39_11090)	gutM	2318324..2318692 (+)	369	WP_176671075.1	transcriptional regulator GutM	-
A6B39_RS11180 (A6B39_11095)	hxpB	2318767..2319414 (+)	648	WP_176671076.1	hexitol phosphatase HxpB	-
A6B39_RS11185 (A6B39_11100)	srlR	2319456..2320253 (+)	798	WP_176671077.1	glucitol operon DNA-binding transcriptional repressor SrlR	-
A6B39_RS11190 (A6B39_11105)	-	2320264..2321199 (+)	936	WP_176671078.1	KpsF/GutQ family sugar-phosphate isomerase	-
A6B39_RS11195 (A6B39_11110)	def	2321270..2321782 (-)	513	WP_176671079.1	peptide deformylase	-
A6B39_RS11200 (A6B39_11115)	dprA	2321871..2323049 (+)	1179	WP_176671080.1	DNA-processing protein DprA	Machinery gene
A6B39_RS11205 (A6B39_11120)	secE	2323173..2323586 (+)	414	WP_176671081.1	preprotein translocase subunit SecE	-
A6B39_RS11210 (A6B39_11125)	nusG	2323588..2324151 (+)	564	WP_027073310.1	transcription termination/antitermination protein NusG	-
A6B39_RS11215 (A6B39_11130)	rplK	2324376..2324804 (+)	429	WP_006248758.1	50S ribosomal protein L11	-
A6B39_RS11220 (A6B39_11135)	rplA	2324809..2325498 (+)	690	WP_042801713.1	50S ribosomal protein L1	-
A6B39_RS11225 (A6B39_11140)	rplJ	2325783..2326274 (+)	492	WP_025235143.1	50S ribosomal protein L10	-
A6B39_RS11230 (A6B39_11145)	rplL	2326330..2326695 (+)	366	WP_176671082.1	50S ribosomal protein L7/L12	-
A6B39_RS11235 (A6B39_11150)	-	2326990..2327235 (+)	246	WP_176671083.1	antitoxin	-
A6B39_RS11240 (A6B39_11155)	-	2327219..2327623 (+)	405	WP_176671084.1	type II toxin-antitoxin system VapC family toxin	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 43716.29 Da
• Isoelectric Point: 6.6432

>NTDB_id=189638 A6B39_RS11200 WP_176671080.1 2321871..2323049(+) (dprA) [Mannheimia granulomatis strain BJ1680.3]
MVYQYDLLRLLQVPQIGPQRIGRLLSEIDFKQFCAYDKHQLRQIGWNEKQIQRWFQPDLNWIEQAFAWAQQPNQRIITLF
DEEYPFLLRQISTAPPVLFVKGYVESLSLPQIAIVGSRDYSPYGEYWAVKFATDLTQNHLVVTSGLAIGIDGFAHKQVVA
EKGTTIAVLGSGLNQIYPARHKNLADQMIDLGGALVSEFSPNQPPLAENFPRRNRIISGLSIGTLVVEATVNSGSLITAR
YALEQGREVFAIPNAIQSPYAQGCHKLIKEGALLVESVTDILDAIAYQRQPQQVALFEDEKPKVVQAVKKTENFAKTPLP
CQQSERQAKSVKNLPNLTACQQQIYQQLSLEPIPVDNLAKTLQIPVEALLVELLGLELSGVIKQVSGGYVIG

Nucleotide

• Length: 1179 bp

>NTDB_id=189638 A6B39_RS11200 WP_176671080.1 2321871..2323049(+) (dprA) [Mannheimia granulomatis strain BJ1680.3]
ATGGTATATCAGTATGATTTATTACGCTTATTGCAGGTTCCGCAGATTGGGCCGCAACGAATTGGCAGATTATTGTCAGA
GATCGATTTCAAACAGTTTTGTGCTTATGATAAACATCAGCTTCGGCAAATCGGTTGGAATGAAAAGCAGATTCAGCGCT
GGTTTCAGCCGGATCTAAATTGGATTGAGCAAGCATTTGCTTGGGCTCAGCAGCCGAATCAGCGCATTATTACGCTATTT
GATGAGGAATATCCTTTTTTATTACGGCAAATTTCAACCGCTCCTCCCGTGTTATTTGTAAAAGGGTATGTGGAAAGTTT
ATCGCTCCCACAAATTGCGATTGTCGGCAGTCGAGATTATTCCCCTTATGGAGAATATTGGGCAGTTAAATTTGCGACTG
ATTTAACCCAGAATCATCTTGTGGTGACAAGCGGTTTAGCAATTGGCATTGATGGTTTCGCTCATAAGCAAGTGGTAGCA
GAAAAGGGCACGACAATTGCGGTTTTGGGAAGTGGATTAAATCAAATTTACCCGGCTCGTCATAAAAACTTAGCTGATCA
GATGATAGATTTAGGTGGAGCATTAGTTTCGGAGTTTTCACCGAATCAGCCGCCATTGGCAGAAAATTTCCCTCGTCGTA
ATCGTATTATCAGTGGTTTATCCATAGGGACGTTAGTGGTTGAAGCAACGGTAAATAGTGGCTCACTTATTACTGCTCGA
TATGCGTTAGAGCAAGGTAGAGAGGTTTTTGCTATTCCCAATGCGATTCAAAGTCCGTATGCGCAAGGCTGTCATAAATT
AATCAAAGAGGGGGCTTTGTTAGTAGAGTCTGTAACAGATATCTTGGATGCAATAGCTTATCAACGACAACCACAGCAAG
TCGCATTGTTTGAAGATGAAAAGCCTAAGGTGGTACAAGCGGTCAAAAAAACAGAAAATTTTGCAAAAACACCTTTGCCT
TGCCAACAGTCTGAAAGGCAAGCAAAATCAGTAAAAAACTTGCCAAATTTAACCGCTTGCCAGCAGCAGATTTATCAACA
ACTGAGCTTAGAGCCAATTCCTGTGGATAATTTAGCTAAGACACTTCAAATTCCTGTTGAAGCACTATTAGTAGAATTGT
TAGGGCTGGAATTAAGCGGGGTGATTAAACAGGTAAGTGGGGGATATGTGATTGGTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (70-276)

• DprA winged helix domain (DprA_WH) (333-388)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	67.684	100	0.679
dprA	Haemophilus influenzae Rd KW20	48.315	90.816	0.439
dprA	Vibrio campbellii strain DS40M4	44.531	97.959	0.436
dprA	Vibrio cholerae strain A1552	41.432	99.745	0.413