Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | BA953_RS10805 | Genome accession | NZ_CP016556 |
| Coordinates | 2353507..2354154 (-) | Length | 215 a.a. |
| NCBI ID | WP_006958300.1 | Uniprot ID | A0A097QHL5 |
| Organism | Vibrio coralliilyticus strain 58 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2348507..2359154
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BA953_RS10795 (BA953_10795) | uvrA | 2349555..2352377 (-) | 2823 | WP_065741108.1 | excinuclease ABC subunit UvrA | - |
| BA953_RS10800 (BA953_10800) | galU | 2352517..2353389 (-) | 873 | WP_006958301.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| BA953_RS10805 (BA953_10805) | qstR | 2353507..2354154 (-) | 648 | WP_006958300.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| BA953_RS10810 (BA953_10810) | ssb | 2354436..2354984 (+) | 549 | WP_006958299.1 | single-stranded DNA-binding protein | Machinery gene |
| BA953_RS10815 (BA953_10815) | csrD | 2355132..2357147 (+) | 2016 | WP_006958298.1 | RNase E specificity factor CsrD | - |
| BA953_RS10820 (BA953_10820) | - | 2357144..2358583 (+) | 1440 | WP_065741109.1 | MSHA biogenesis protein MshI | - |
Sequence
Protein
Download Length: 215 a.a. Molecular weight: 25102.09 Da Isoelectric Point: 8.7680
>NTDB_id=189160 BA953_RS10805 WP_006958300.1 2353507..2354154(-) (qstR) [Vibrio coralliilyticus strain 58]
MTKNIYTRTIYFLCEDSSQNNRFIHQIEKQLGVDIPHIEPNELMLAMQQHKHKILMIDYQNYRKLNNQIRDLPLSNKMFE
TIIFNVEKRLTTEELLCFGNLKGLFYQDDSVEAIAKGCGEIINSQNWLPRKVAAQLLHYYRHVVLSQTAPATVDLTSREI
QILRCLKTGASNMQIAEDLFISEFTVKSHLYQIFKKLSVKNRVQAIAWANQHMLS
MTKNIYTRTIYFLCEDSSQNNRFIHQIEKQLGVDIPHIEPNELMLAMQQHKHKILMIDYQNYRKLNNQIRDLPLSNKMFE
TIIFNVEKRLTTEELLCFGNLKGLFYQDDSVEAIAKGCGEIINSQNWLPRKVAAQLLHYYRHVVLSQTAPATVDLTSREI
QILRCLKTGASNMQIAEDLFISEFTVKSHLYQIFKKLSVKNRVQAIAWANQHMLS
Nucleotide
Download Length: 648 bp
>NTDB_id=189160 BA953_RS10805 WP_006958300.1 2353507..2354154(-) (qstR) [Vibrio coralliilyticus strain 58]
ATGACTAAAAACATCTATACCAGAACCATCTACTTTCTCTGTGAAGACAGCTCTCAAAACAACCGTTTCATTCATCAAAT
AGAGAAGCAACTCGGTGTTGATATTCCGCACATTGAACCAAACGAGTTGATGCTTGCCATGCAGCAACACAAACATAAAA
TTCTAATGATAGATTACCAAAACTACAGAAAGCTCAATAATCAGATTCGAGATTTGCCTCTATCGAATAAAATGTTTGAA
ACCATAATCTTTAATGTAGAAAAAAGACTTACTACAGAAGAGCTATTGTGCTTTGGCAATTTGAAAGGATTGTTTTATCA
AGATGACTCCGTTGAAGCCATCGCTAAAGGATGTGGTGAGATAATCAACAGTCAAAACTGGCTGCCCCGCAAAGTCGCAG
CTCAGCTACTGCATTACTATCGTCACGTTGTGCTTAGCCAGACTGCCCCTGCAACTGTGGATTTAACCTCACGTGAAATT
CAGATTCTACGCTGTTTAAAAACTGGGGCATCCAATATGCAAATCGCAGAGGATCTGTTTATTAGTGAGTTTACTGTTAA
GTCCCACCTTTATCAGATTTTCAAAAAGCTTTCCGTTAAAAATCGTGTCCAAGCCATTGCTTGGGCTAATCAACATATGC
TGTCTTAA
ATGACTAAAAACATCTATACCAGAACCATCTACTTTCTCTGTGAAGACAGCTCTCAAAACAACCGTTTCATTCATCAAAT
AGAGAAGCAACTCGGTGTTGATATTCCGCACATTGAACCAAACGAGTTGATGCTTGCCATGCAGCAACACAAACATAAAA
TTCTAATGATAGATTACCAAAACTACAGAAAGCTCAATAATCAGATTCGAGATTTGCCTCTATCGAATAAAATGTTTGAA
ACCATAATCTTTAATGTAGAAAAAAGACTTACTACAGAAGAGCTATTGTGCTTTGGCAATTTGAAAGGATTGTTTTATCA
AGATGACTCCGTTGAAGCCATCGCTAAAGGATGTGGTGAGATAATCAACAGTCAAAACTGGCTGCCCCGCAAAGTCGCAG
CTCAGCTACTGCATTACTATCGTCACGTTGTGCTTAGCCAGACTGCCCCTGCAACTGTGGATTTAACCTCACGTGAAATT
CAGATTCTACGCTGTTTAAAAACTGGGGCATCCAATATGCAAATCGCAGAGGATCTGTTTATTAGTGAGTTTACTGTTAA
GTCCCACCTTTATCAGATTTTCAAAAAGCTTTCCGTTAAAAATCGTGTCCAAGCCATTGCTTGGGCTAATCAACATATGC
TGTCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio cholerae strain A1552 |
59.813 |
99.535 |
0.595 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
56.682 |
100 |
0.572 |
| qstR | Vibrio campbellii strain DS40M4 |
57.209 |
100 |
0.572 |