Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BBH51_RS05445 | Genome accession | NZ_CP016553 |
| Coordinates | 1094542..1095027 (-) | Length | 161 a.a. |
| NCBI ID | WP_014702365.1 | Uniprot ID | A0A142G044 |
| Organism | Aggregatibacter actinomycetemcomitans strain IDH781 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1089542..1100027
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBH51_RS12615 (BBH51_05430) | - | 1091046..1091234 (-) | 189 | WP_005543949.1 | hypothetical protein | - |
| BBH51_RS05435 (BBH51_05435) | - | 1091401..1093572 (+) | 2172 | WP_005543943.1 | YecA family protein | - |
| BBH51_RS05440 (BBH51_05440) | - | 1093786..1094352 (+) | 567 | WP_005543941.1 | efflux RND transporter permease subunit | - |
| BBH51_RS05445 (BBH51_05445) | ssb | 1094542..1095027 (-) | 486 | WP_014702365.1 | single-stranded DNA-binding protein | Machinery gene |
| BBH51_RS05450 (BBH51_05450) | uvrA | 1095197..1098028 (+) | 2832 | WP_005543937.1 | excinuclease ABC subunit UvrA | - |
| BBH51_RS05455 (BBH51_05455) | - | 1098106..1098480 (+) | 375 | WP_061866548.1 | transposase | - |
| BBH51_RS12065 | - | 1098522..1098779 (+) | 258 | WP_145916692.1 | IS3 family transposase | - |
| BBH51_RS05460 (BBH51_05460) | - | 1098773..1099282 (+) | 510 | WP_235605831.1 | IS3 family transposase | - |
| BBH51_RS05465 (BBH51_05465) | - | 1099358..1099768 (-) | 411 | WP_005589530.1 | MerR family transcriptional regulator | - |
Sequence
Protein
Download Length: 161 a.a. Molecular weight: 17972.83 Da Isoelectric Point: 5.3111
>NTDB_id=189135 BBH51_RS05445 WP_014702365.1 1094542..1095027(-) (ssb) [Aggregatibacter actinomycetemcomitans strain IDH781]
MAGVNKVIIVGNLGNDPEIRTMPNGEAVANITVATSESWNDKNTGERREVTEWHRIVFYRRQAEVAGEYLRKGSKVYVEG
RLRTRKWQDQNGQDRYTTEIQGDVLQMLDSRADRQSGGNYAPAAVAQPSYPSQQQSAPRSAPASKPTAEAPMDNFDDDIP
F
MAGVNKVIIVGNLGNDPEIRTMPNGEAVANITVATSESWNDKNTGERREVTEWHRIVFYRRQAEVAGEYLRKGSKVYVEG
RLRTRKWQDQNGQDRYTTEIQGDVLQMLDSRADRQSGGNYAPAAVAQPSYPSQQQSAPRSAPASKPTAEAPMDNFDDDIP
F
Nucleotide
Download Length: 486 bp
>NTDB_id=189135 BBH51_RS05445 WP_014702365.1 1094542..1095027(-) (ssb) [Aggregatibacter actinomycetemcomitans strain IDH781]
ATGGCTGGAGTAAATAAAGTGATTATCGTCGGTAATTTGGGTAACGATCCTGAAATCCGCACCATGCCGAATGGCGAAGC
CGTTGCCAACATTACCGTTGCCACCAGTGAAAGCTGGAATGACAAAAATACCGGCGAACGCCGCGAAGTCACTGAATGGC
ACCGTATCGTATTTTATCGCCGCCAGGCGGAAGTGGCGGGGGAATACCTGCGTAAAGGCTCGAAAGTCTATGTCGAAGGA
CGCTTAAGAACCCGTAAATGGCAGGATCAAAACGGTCAAGATCGCTACACCACCGAAATCCAAGGCGACGTTTTACAAAT
GTTAGACAGCCGTGCCGATCGCCAATCCGGCGGAAACTACGCACCGGCTGCAGTTGCCCAACCAAGTTATCCAAGCCAAC
AACAAAGCGCCCCACGCAGCGCGCCGGCAAGTAAACCTACCGCCGAAGCGCCGATGGATAATTTTGATGATGATATTCCG
TTCTGA
ATGGCTGGAGTAAATAAAGTGATTATCGTCGGTAATTTGGGTAACGATCCTGAAATCCGCACCATGCCGAATGGCGAAGC
CGTTGCCAACATTACCGTTGCCACCAGTGAAAGCTGGAATGACAAAAATACCGGCGAACGCCGCGAAGTCACTGAATGGC
ACCGTATCGTATTTTATCGCCGCCAGGCGGAAGTGGCGGGGGAATACCTGCGTAAAGGCTCGAAAGTCTATGTCGAAGGA
CGCTTAAGAACCCGTAAATGGCAGGATCAAAACGGTCAAGATCGCTACACCACCGAAATCCAAGGCGACGTTTTACAAAT
GTTAGACAGCCGTGCCGATCGCCAATCCGGCGGAAACTACGCACCGGCTGCAGTTGCCCAACCAAGTTATCCAAGCCAAC
AACAAAGCGCCCCACGCAGCGCGCCGGCAAGTAAACCTACCGCCGAAGCGCCGATGGATAATTTTGATGATGATATTCCG
TTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
70.556 |
100 |
0.789 |
| ssb | Vibrio cholerae strain A1552 |
57.803 |
100 |
0.621 |
| ssb | Neisseria gonorrhoeae MS11 |
47.126 |
100 |
0.509 |
| ssb | Neisseria meningitidis MC58 |
45.763 |
100 |
0.503 |