Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | BBP08_RS00210 | Genome accession | NZ_CP016501 |
| Coordinates | 46787..47278 (+) | Length | 163 a.a. |
| NCBI ID | WP_000609585.1 | Uniprot ID | A0AAV3JH34 |
| Organism | Streptococcus agalactiae strain WC1535 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 41787..52278
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBP08_RS00185 (BBP08_00180) | - | 42559..43059 (+) | 501 | WP_000446812.1 | phosphatase PAP2 family protein | - |
| BBP08_RS00190 (BBP08_00185) | trxA | 43140..43454 (+) | 315 | WP_001162959.1 | thioredoxin | - |
| BBP08_RS00195 (BBP08_00190) | - | 43500..44093 (-) | 594 | WP_000402394.1 | helix-turn-helix domain-containing protein | - |
| BBP08_RS00200 (BBP08_00195) | mutY | 44270..45424 (-) | 1155 | WP_000566235.1 | A/G-specific adenine glycosylase | - |
| BBP08_RS00205 (BBP08_00200) | rpsF | 46488..46775 (+) | 288 | WP_001151773.1 | 30S ribosomal protein S6 | - |
| BBP08_RS00210 (BBP08_00205) | ssbA | 46787..47278 (+) | 492 | WP_000609585.1 | single-stranded DNA-binding protein | Machinery gene |
| BBP08_RS00215 (BBP08_00210) | rpsR | 47323..47562 (+) | 240 | WP_000068665.1 | 30S ribosomal protein S18 | - |
| BBP08_RS00220 (BBP08_00215) | - | 47732..48676 (+) | 945 | WP_000812121.1 | magnesium transporter CorA family protein | - |
| BBP08_RS00225 (BBP08_00220) | - | 48701..49372 (+) | 672 | WP_000174846.1 | DUF1129 domain-containing protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18165.81 Da Isoelectric Point: 4.9119
>NTDB_id=188608 BBP08_RS00210 WP_000609585.1 46787..47278(+) (ssbA) [Streptococcus agalactiae strain WC1535]
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=188608 BBP08_RS00210 WP_000609585.1 46787..47278(+) (ssbA) [Streptococcus agalactiae strain WC1535]
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACGCGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACGCGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.714 |
100 |
0.62 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.064 |
100 |
0.62 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.963 |
66.871 |
0.374 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
65.031 |
0.368 |