Detailed information NTG0188470

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: B7L46_RS04465
• Genome accession: NZ_CP020597
• Coordinates: 718599..719603 (+)
• Length: 334 a.a.
• NCBI ID: WP_001154002.1
• Uniprot ID: A3M7W1
• Organism: Acinetobacter baumannii strain HWBA8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 713599..724603

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7L46_RS04455 (B7L46_04460)	-	716559..717899 (+)	1341	WP_000437078.1	deoxyguanosinetriphosphate triphosphohydrolase	-
B7L46_RS04460 (B7L46_04465)	ruvA	717991..718590 (+)	600	WP_000578663.1	Holliday junction branch migration protein RuvA	-
B7L46_RS04465 (B7L46_04470)	ruvB	718599..719603 (+)	1005	WP_001154002.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
B7L46_RS04470 (B7L46_04475)	-	719808..721142 (+)	1335	WP_000276846.1	M20 family metallopeptidase	-
B7L46_RS04475 (B7L46_04480)	ybgC	721353..721760 (+)	408	WP_001273591.1	tol-pal system-associated acyl-CoA thioesterase	-
B7L46_RS04480 (B7L46_04485)	tolQ	721784..722482 (+)	699	WP_000224630.1	protein TolQ	-
B7L46_RS04485 (B7L46_04490)	tolR	722482..722934 (+)	453	WP_001007562.1	protein TolR	-
B7L46_RS04490 (B7L46_04495)	tolA	722938..724341 (+)	1404	WP_001039152.1	cell envelope integrity protein TolA	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36815.05 Da
• Isoelectric Point: 4.7936

>NTDB_id=188470 B7L46_RS04465 WP_001154002.1 718599..719603(+) (ruvB) [Acinetobacter baumannii strain HWBA8]
MQDRLISGTEKPEDHFDRAIRPTSLADYIGQPVVREQMEIFIGAARGRGEALDHTLIFGPPGLGKTTLANIIAREMGGNL
KSTSGPVLERAGDLAAMLTNLEEGDVLFIDEIHRLSPVIEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVAATTR
AGLLTSPLRDRFGIVQRLEFYSVEDLTHIVSRSANLMDVPITVEGAEEVARRSRGTPRIANRLLRRVRDYAQVKGTGEVN
HEMAQRALDMLNVDKAGLDTLDRRYLSMLLERFDGGPAGVEALAAAMAEDSGTLEDVIEPYLIQQGYVMRTARGRIATNQ
SYLQFGMTPPEPKN

Nucleotide

• Length: 1005 bp

>NTDB_id=188470 B7L46_RS04465 WP_001154002.1 718599..719603(+) (ruvB) [Acinetobacter baumannii strain HWBA8]
ATGCAAGACCGTCTAATCAGTGGAACAGAAAAACCTGAAGATCATTTTGATCGGGCTATTCGACCGACTTCACTTGCCGA
TTATATCGGGCAACCAGTCGTACGCGAGCAAATGGAAATTTTCATCGGTGCGGCTCGTGGTCGTGGTGAAGCACTCGATC
ACACACTGATTTTCGGTCCACCGGGCTTAGGAAAAACCACGCTTGCCAATATTATTGCGCGTGAAATGGGTGGCAATCTC
AAATCCACTTCAGGGCCTGTTTTAGAGCGTGCGGGTGATTTGGCTGCAATGCTGACTAACCTTGAAGAAGGCGATGTTTT
ATTTATTGATGAAATTCACCGTCTTTCACCAGTGATTGAAGAAATTCTTTATCCGGCAATGGAAGATTACCAACTTGATA
TCATGATTGGTGAAGGTCCTGCTGCTCGTTCAATTAAACTCGATTTACCACCTTTTACGCTCGTTGCTGCGACCACACGT
GCCGGCTTACTCACCTCGCCTCTACGTGACCGTTTCGGTATTGTGCAACGTCTTGAATTCTATTCTGTAGAAGACTTAAC
TCACATCGTGTCACGATCTGCAAACCTCATGGATGTACCCATTACAGTTGAGGGTGCAGAAGAAGTTGCACGCCGTTCAC
GCGGAACACCGCGTATTGCCAATCGTTTATTACGCCGTGTACGTGACTATGCACAAGTAAAAGGTACAGGCGAAGTTAAC
CATGAAATGGCACAACGTGCGCTTGATATGCTTAATGTCGATAAAGCTGGTTTAGATACCTTAGACCGACGTTATTTAAG
TATGTTGTTAGAACGTTTTGATGGTGGACCTGCTGGTGTTGAAGCCCTTGCAGCTGCTATGGCTGAAGATAGCGGAACAC
TTGAAGATGTTATTGAACCTTATTTAATTCAGCAAGGTTATGTTATGCGTACTGCACGAGGTCGCATTGCAACCAACCAA
TCTTATTTGCAGTTTGGCATGACGCCACCTGAGCCTAAAAACTAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-322)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

3D structure

• AlphaFold DB: A3M7W1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	57.704	99.102	0.572
ruvB	Synechocystis sp. PCC 6803	57.325	94.012	0.539
ruvB	Streptococcus pneumoniae TIGR4	56.113	95.509	0.536
ruvB	Streptococcus pneumoniae R6	56.113	95.509	0.536
ruvB	Streptococcus pneumoniae D39	56.113	95.509	0.536
ruvB	Helicobacter pylori 26695	54.934	91.018	0.5