Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | FORC37_RS04670 | Genome accession | NZ_CP016321 |
| Coordinates | 965430..965732 (+) | Length | 100 a.a. |
| NCBI ID | WP_038968878.1 | Uniprot ID | - |
| Organism | Vibrio vulnificus strain FORC_037 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 960430..970732
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC37_RS04655 (FORC37_0878) | lon | 960444..962795 (+) | 2352 | WP_038968879.1 | endopeptidase La | - |
| FORC37_RS04660 (FORC37_0879) | - | 962989..963261 (+) | 273 | WP_013572181.1 | HU family DNA-binding protein | - |
| FORC37_RS04665 (FORC37_0880) | ppiD | 963438..965297 (+) | 1860 | WP_026130414.1 | peptidylprolyl isomerase | - |
| FORC37_RS04670 (FORC37_0881) | comEA | 965430..965732 (+) | 303 | WP_038968878.1 | ComEA family DNA-binding protein | Machinery gene |
| FORC37_RS04675 (FORC37_0882) | rrtA | 965779..966339 (-) | 561 | WP_241543086.1 | rhombosortase | - |
| FORC37_RS04680 (FORC37_0883) | - | 966343..966951 (+) | 609 | WP_045588801.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| FORC37_RS04685 (FORC37_0884) | - | 966973..968304 (-) | 1332 | WP_045588802.1 | anti-phage deoxyguanosine triphosphatase | - |
| FORC37_RS04690 (FORC37_0885) | yfbR | 968310..968894 (-) | 585 | WP_017420943.1 | 5'-deoxynucleotidase | - |
| FORC37_RS04695 (FORC37_0886) | - | 968977..970191 (-) | 1215 | WP_017420942.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 10931.82 Da Isoelectric Point: 9.6577
>NTDB_id=186870 FORC37_RS04670 WP_038968878.1 965430..965732(+) (comEA) [Vibrio vulnificus strain FORC_037]
MKQVITLLAMLMAFSFPSVSFADSATKAAEKYEGIEISVNINTATAEEIAMMLKGVGIKKAQQIVDFREAHGPFKTVDEL
VQVKGIGKSTIEKNQSRIKL
MKQVITLLAMLMAFSFPSVSFADSATKAAEKYEGIEISVNINTATAEEIAMMLKGVGIKKAQQIVDFREAHGPFKTVDEL
VQVKGIGKSTIEKNQSRIKL
Nucleotide
Download Length: 303 bp
>NTDB_id=186870 FORC37_RS04670 WP_038968878.1 965430..965732(+) (comEA) [Vibrio vulnificus strain FORC_037]
ATGAAACAGGTAATTACCCTTTTAGCCATGCTAATGGCATTCTCTTTTCCTTCCGTTTCTTTTGCGGACTCTGCAACGAA
AGCAGCCGAGAAATATGAAGGCATTGAGATTTCCGTCAACATCAACACGGCAACAGCAGAAGAAATTGCCATGATGTTAA
AAGGCGTTGGTATTAAAAAAGCACAGCAAATTGTTGACTTTAGAGAAGCTCATGGACCGTTTAAAACGGTTGATGAGTTA
GTTCAAGTGAAAGGTATCGGTAAGTCAACGATTGAGAAAAATCAGTCACGGATTAAGTTGTAA
ATGAAACAGGTAATTACCCTTTTAGCCATGCTAATGGCATTCTCTTTTCCTTCCGTTTCTTTTGCGGACTCTGCAACGAA
AGCAGCCGAGAAATATGAAGGCATTGAGATTTCCGTCAACATCAACACGGCAACAGCAGAAGAAATTGCCATGATGTTAA
AAGGCGTTGGTATTAAAAAAGCACAGCAAATTGTTGACTTTAGAGAAGCTCATGGACCGTTTAAAACGGTTGATGAGTTA
GTTCAAGTGAAAGGTATCGGTAAGTCAACGATTGAGAAAAATCAGTCACGGATTAAGTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
59 |
100 |
0.59 |
| comEA | Vibrio campbellii strain DS40M4 |
54 |
100 |
0.54 |
| comEA | Vibrio cholerae C6706 |
51.02 |
98 |
0.5 |
| comEA | Vibrio cholerae strain A1552 |
51.02 |
98 |
0.5 |