Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | A0O31_RS05595 | Genome accession | NZ_CP016312 |
| Coordinates | 1073094..1073402 (-) | Length | 102 a.a. |
| NCBI ID | WP_071677021.1 | Uniprot ID | A0A1J0LTC7 |
| Organism | Thermus brockianus strain GE-1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1064212..1074690 | 1073094..1073402 | within | 0 |
Gene organization within MGE regions
Location: 1064212..1074690
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A0O31_RS05560 (A0O31_01144) | dnaN | 1064212..1065330 (-) | 1119 | WP_071677015.1 | DNA polymerase III subunit beta | - |
| A0O31_RS05565 (A0O31_01145) | dnaA | 1065632..1066945 (-) | 1314 | WP_071677016.1 | chromosomal replication initiator protein DnaA | - |
| A0O31_RS05570 (A0O31_01146) | mnmG | 1066998..1068800 (+) | 1803 | WP_420855814.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG | - |
| A0O31_RS05575 | rsmG | 1068829..1069553 (+) | 725 | Protein_1088 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
| A0O31_RS05580 (A0O31_01148) | soj | 1069547..1070296 (+) | 750 | WP_071677018.1 | chromosome-partitioning ATPase Soj | - |
| A0O31_RS05585 (A0O31_01149) | - | 1070280..1071086 (+) | 807 | WP_071677019.1 | ParB/RepB/Spo0J family partition protein | - |
| A0O31_RS05590 (A0O31_01150) | comA/comEC | 1071074..1073107 (-) | 2034 | WP_071677020.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| A0O31_RS05595 (A0O31_01151) | comEA | 1073094..1073402 (-) | 309 | WP_071677021.1 | ComEA family DNA-binding protein | Machinery gene |
| A0O31_RS13050 (A0O31_01152) | - | 1073375..1073638 (-) | 264 | WP_237259051.1 | hypothetical protein | - |
| A0O31_RS05605 (A0O31_01153) | - | 1074061..1074690 (+) | 630 | WP_071677930.1 | glycerophosphodiester phosphodiesterase | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 11047.16 Da Isoelectric Point: 9.8638
>NTDB_id=186786 A0O31_RS05595 WP_071677021.1 1073094..1073402(-) (comEA) [Thermus brockianus strain GE-1]
MVLGYLLAVALLALLSLWPKVAPSPKAVRVETYVQAAFTPPPPEPVSLNQASLEALEALPGVGPVLARRILEGRPYERVE
DLLKVKGIGPATLEKLRPYVRP
MVLGYLLAVALLALLSLWPKVAPSPKAVRVETYVQAAFTPPPPEPVSLNQASLEALEALPGVGPVLARRILEGRPYERVE
DLLKVKGIGPATLEKLRPYVRP
Nucleotide
Download Length: 309 bp
>NTDB_id=186786 A0O31_RS05595 WP_071677021.1 1073094..1073402(-) (comEA) [Thermus brockianus strain GE-1]
GTGGTTCTTGGCTACCTCCTGGCGGTAGCCCTCTTGGCCCTCCTCAGCCTCTGGCCCAAGGTGGCCCCAAGCCCCAAGGC
GGTGCGGGTGGAAACCTATGTCCAGGCCGCCTTCACCCCGCCACCGCCTGAGCCGGTGAGCCTGAACCAGGCGAGCCTCG
AGGCGCTGGAGGCCCTCCCCGGCGTGGGCCCGGTCCTGGCCCGGCGCATTCTGGAGGGGAGGCCGTACGAGCGGGTGGAA
GACCTTCTCAAGGTGAAGGGCATCGGCCCCGCCACCCTAGAGAAGCTCCGGCCGTATGTCCGCCCCTAG
GTGGTTCTTGGCTACCTCCTGGCGGTAGCCCTCTTGGCCCTCCTCAGCCTCTGGCCCAAGGTGGCCCCAAGCCCCAAGGC
GGTGCGGGTGGAAACCTATGTCCAGGCCGCCTTCACCCCGCCACCGCCTGAGCCGGTGAGCCTGAACCAGGCGAGCCTCG
AGGCGCTGGAGGCCCTCCCCGGCGTGGGCCCGGTCCTGGCCCGGCGCATTCTGGAGGGGAGGCCGTACGAGCGGGTGGAA
GACCTTCTCAAGGTGAAGGGCATCGGCCCCGCCACCCTAGAGAAGCTCCGGCCGTATGTCCGCCCCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
75.49 |
100 |
0.755 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.389 |
70.588 |
0.363 |