Detailed information NTG0186398

Bioinformatically predicted

Overview

• Name: comFC/cflB
• Type: Machinery gene
• Locus tag: A6J72_RS03055
• Genome accession: NZ_CP020433
• Coordinates: 615801..616466 (-)
• Length: 221 a.a.
• NCBI ID: WP_003078227.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain FDAARGOS_233
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 610801..621466

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J72_RS03025 (A6J72_03020)	rlmN	610958..612040 (-)	1083	WP_009568160.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
A6J72_RS03030 (A6J72_03025)	-	612074..612637 (-)	564	WP_003073618.1	YutD family protein	-
A6J72_RS03035 (A6J72_03030)	sepM	612919..613974 (-)	1056	WP_003078259.1	SepM family pheromone-processing serine protease	Regulator
A6J72_RS03040 (A6J72_03035)	coaD	613955..614452 (-)	498	WP_003078294.1	pantetheine-phosphate adenylyltransferase	-
A6J72_RS03045 (A6J72_03040)	rsmD	614442..614981 (-)	540	WP_082311747.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
A6J72_RS03050 (A6J72_03045)	hpf	615180..615722 (-)	543	WP_003073626.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
A6J72_RS03055 (A6J72_03050)	comFC/cflB	615801..616466 (-)	666	WP_003078227.1	ComF family protein	Machinery gene
A6J72_RS03060 (A6J72_03055)	-	616463..617763 (-)	1301	Protein_602	DEAD/DEAH box helicase	-
A6J72_RS03065 (A6J72_03060)	-	617820..618455 (+)	636	WP_082311748.1	YigZ family protein	-
A6J72_RS03070 (A6J72_03065)	cysK	618554..619483 (+)	930	WP_082311749.1	cysteine synthase A	-
A6J72_RS03075 (A6J72_03070)	-	619689..619964 (-)	276	Protein_605	cell filamentation protein Fic	-
A6J72_RS03080 (A6J72_03075)	-	620176..620322 (-)	147	WP_020998973.1	hypothetical protein	-
A6J72_RS09700	-	620404..620565 (-)	162	WP_003070190.1	DUF6290 family protein	-

Sequence

Protein

• Length: 221 a.a.
• Molecular weight: 25392.34 Da
• Isoelectric Point: 7.6869

>NTDB_id=186398 A6J72_RS03055 WP_003078227.1 615801..616466(-) (comFC/cflB) [Streptococcus intermedius strain FDAARGOS_233]
MNVCVLCDNSLGEKLTFCDLLSLTKPKIRACDACFDKFQRISEQHCPKCYRDGTSEICVDCQVWLEKGKEVSHKSCFVYN
EAMKDFFSQYKFQGDYALYSVFTEILQKELKAYSDYTLVPIPVSSEKYQKRGFNQVTALLEGTKLPFREILEKYDTIAQS
SKTRKERLQSQQCFKLKDSVQPPTKVLLLDDIYTTGSTLQLAKEILVEAGVKEIMTFSLAR

Nucleotide

• Length: 666 bp

>NTDB_id=186398 A6J72_RS03055 WP_003078227.1 615801..616466(-) (comFC/cflB) [Streptococcus intermedius strain FDAARGOS_233]
ATGAATGTATGTGTTTTATGTGACAATTCTCTTGGCGAAAAACTGACATTTTGTGATTTATTGTCCTTGACTAAGCCAAA
AATAAGGGCTTGTGATGCCTGCTTTGACAAATTTCAGCGTATTTCAGAACAGCATTGTCCTAAGTGTTATCGGGATGGAA
CAAGTGAAATCTGTGTAGATTGCCAAGTATGGCTGGAAAAAGGAAAAGAAGTTTCTCATAAAAGTTGTTTTGTTTATAAT
GAAGCTATGAAAGACTTCTTTAGTCAATATAAATTTCAAGGAGATTATGCTCTTTATTCTGTATTTACAGAGATTTTGCA
AAAAGAATTAAAAGCCTATAGCGATTATACACTTGTTCCTATTCCTGTAAGTAGTGAAAAGTACCAGAAGCGAGGCTTCA
ACCAAGTAACAGCTCTCCTTGAGGGGACAAAGTTGCCGTTTAGAGAAATTTTAGAAAAGTATGATACGATTGCTCAATCA
AGTAAGACAAGAAAGGAGCGTTTGCAAAGTCAGCAGTGTTTTAAACTGAAAGACAGTGTTCAGCCTCCGACAAAAGTTCT
TTTGCTAGATGACATTTATACGACTGGCTCAACCCTACAGTTAGCAAAGGAAATTTTAGTGGAAGCGGGAGTGAAAGAAA
TTATGACATTTTCATTGGCAAGGTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC/cflB	Streptococcus mitis SK321	48.165	98.643	0.475
comFC/cflB	Streptococcus pneumoniae TIGR4	47.248	98.643	0.466
comFC/cflB	Streptococcus mitis NCTC 12261	46.789	98.643	0.462
comFC/cflB	Streptococcus pneumoniae Rx1	46.789	98.643	0.462
comFC/cflB	Streptococcus pneumoniae D39	46.789	98.643	0.462
comFC/cflB	Streptococcus pneumoniae R6	46.789	98.643	0.462