Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | A6B44_RS10655 | Genome accession | NZ_CP016180 |
| Coordinates | 2212935..2213282 (-) | Length | 115 a.a. |
| NCBI ID | WP_246253115.1 | Uniprot ID | A0A1H7UFX5 |
| Organism | Pasteurella skyensis strain 95A1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2207935..2218282
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6B44_RS10635 (A6B44_10520) | - | 2208550..2209029 (+) | 480 | WP_090919818.1 | TRAP transporter small permease | - |
| A6B44_RS10640 (A6B44_10525) | - | 2209029..2210306 (+) | 1278 | WP_090919821.1 | TRAP transporter large permease subunit | - |
| A6B44_RS10645 (A6B44_10530) | - | 2210338..2211321 (+) | 984 | WP_090919823.1 | TRAP transporter substrate-binding protein | - |
| A6B44_RS10650 (A6B44_10535) | - | 2211418..2212869 (+) | 1452 | WP_090919826.1 | FGGY-family carbohydrate kinase | - |
| A6B44_RS10655 (A6B44_10540) | comEA/comE1 | 2212935..2213282 (-) | 348 | WP_246253115.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| A6B44_RS10660 (A6B44_10545) | - | 2213514..2214449 (+) | 936 | WP_090919829.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| A6B44_RS10665 (A6B44_10550) | waaF | 2214505..2215542 (+) | 1038 | WP_090919832.1 | lipopolysaccharide heptosyltransferase II | - |
| A6B44_RS10670 (A6B44_10555) | rfaC | 2215542..2216525 (+) | 984 | WP_090919835.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| A6B44_RS10675 (A6B44_10560) | ubiB | 2216515..2218137 (+) | 1623 | WP_090919839.1 | ubiquinone biosynthesis regulatory protein kinase UbiB | - |
Sequence
Protein
Download Length: 115 a.a. Molecular weight: 12531.69 Da Isoelectric Point: 10.8509
>NTDB_id=186117 A6B44_RS10655 WP_246253115.1 2212935..2213282(-) (comEA/comE1) [Pasteurella skyensis strain 95A1]
MTFLKNCGLGVLLGLFATAVMAKDIPTKTSQSTKTNTTLTTQKVKVKSHINTVNINTATASELKDKLVGIGVKKAQTIVE
HRQKHGKFLTVDQITDVSGIGKVTLEKNRERILIN
MTFLKNCGLGVLLGLFATAVMAKDIPTKTSQSTKTNTTLTTQKVKVKSHINTVNINTATASELKDKLVGIGVKKAQTIVE
HRQKHGKFLTVDQITDVSGIGKVTLEKNRERILIN
Nucleotide
Download Length: 348 bp
>NTDB_id=186117 A6B44_RS10655 WP_246253115.1 2212935..2213282(-) (comEA/comE1) [Pasteurella skyensis strain 95A1]
ATGACATTTTTAAAGAATTGTGGATTAGGTGTACTTTTAGGGTTATTTGCAACAGCTGTTATGGCTAAAGATATCCCAAC
AAAAACATCACAATCAACCAAAACTAATACCACTTTAACGACTCAAAAAGTGAAAGTAAAAAGTCACATAAACACAGTCA
ACATCAATACTGCTACCGCTTCTGAATTGAAAGATAAATTAGTGGGCATTGGCGTAAAAAAAGCACAAACCATCGTTGAA
CATAGACAAAAACACGGTAAATTTCTCACCGTAGATCAAATTACTGATGTTTCAGGCATTGGCAAAGTTACATTAGAAAA
AAATAGAGAACGAATTTTAATTAATTAA
ATGACATTTTTAAAGAATTGTGGATTAGGTGTACTTTTAGGGTTATTTGCAACAGCTGTTATGGCTAAAGATATCCCAAC
AAAAACATCACAATCAACCAAAACTAATACCACTTTAACGACTCAAAAAGTGAAAGTAAAAAGTCACATAAACACAGTCA
ACATCAATACTGCTACCGCTTCTGAATTGAAAGATAAATTAGTGGGCATTGGCGTAAAAAAAGCACAAACCATCGTTGAA
CATAGACAAAAACACGGTAAATTTCTCACCGTAGATCAAATTACTGATGTTTCAGGCATTGGCAAAGTTACATTAGAAAA
AAATAGAGAACGAATTTTAATTAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
52.586 |
100 |
0.53 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
41.284 |
94.783 |
0.391 |
| comEA | Acinetobacter baumannii strain A118 |
32.09 |
100 |
0.374 |