Detailed information NTG0185972

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: A6J46_RS07820
• Genome accession: NZ_CP020419
• Coordinates: 1353222..1354253 (-)
• Length: 343 a.a.
• NCBI ID: WP_003688673.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain FDAARGOS_207
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1348222..1359253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J46_RS07790 (A6J46_07860)	-	1349436..1350050 (+)	615	WP_003691204.1	molybdenum cofactor guanylyltransferase	-
A6J46_RS07795 (A6J46_07865)	-	1350213..1350830 (+)	618	WP_010358100.1	riboflavin synthase	-
A6J46_RS07800 (A6J46_07870)	-	1350838..1351701 (+)	864	WP_003688678.1	ATP-binding protein	-
A6J46_RS07805 (A6J46_07875)	-	1351714..1352148 (-)	435	WP_003688677.1	Spy/CpxP family protein refolding chaperone	-
A6J46_RS07810 (A6J46_07880)	rpe	1352294..1352977 (+)	684	WP_003688675.1	ribulose-phosphate 3-epimerase	-
A6J46_RS07820 (A6J46_07885)	ruvB	1353222..1354253 (-)	1032	WP_003688673.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
A6J46_RS07825 (A6J46_07890)	-	1354337..1354645 (-)	309	WP_003688671.1	hypothetical protein	-
A6J46_RS07835 (A6J46_07900)	-	1355063..1356295 (-)	1233	WP_003695301.1	multifunctional CCA addition/repair protein	-
A6J46_RS07840 (A6J46_07905)	-	1356374..1358002 (-)	1629	WP_025455940.1	ABC-F family ATPase	-
A6J46_RS07845 (A6J46_07910)	-	1358152..1358526 (+)	375	WP_003688664.1	arsenate reductase	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37696.27 Da
• Isoelectric Point: 5.2932

>NTDB_id=185972 A6J46_RS07820 WP_003688673.1 1353222..1354253(-) (ruvB) [Neisseria gonorrhoeae strain FDAARGOS_207]
MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQHKAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTL
AHIIAKELGVNLRQTSGPVLERAGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMDEEGAMEVAKRSRGTPRIANRLLRRVR
DFADVKNNGVIDAAVADAALSMLDVDAQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFL
QRTPRGRMATERAYLHFGLPVEK

Nucleotide

• Length: 1032 bp

>NTDB_id=185972 A6J46_RS07820 WP_003688673.1 1353222..1354253(-) (ruvB) [Neisseria gonorrhoeae strain FDAARGOS_207]
ATGCTGCAAACCGACAACCTGACCGCCGCGCAACCGCAACGCATCGTTGCCGCCCAAACCGCCTCCGCACAGGAAGAACT
GCTCGAACGCGCCCTCCGCCCCAAAACGCTGGACGACTACATCGGGCAGCATAAAGCCAAAGAGCAGCTCGCCATCTTCA
TCCAAGCCGCCAAAAAACGCGGCGAAGCACTCGACCACGTCCTGCTTTTCGGCCCGCCCGGACTGGGCAAAACCACCCTT
GCCCACATCATCGCCAAAGAGTTGGGCGTAAATTTGCGCCAAACCAGCGGCCCCGTCCTCGAACGCGCCGGCGACCTCGC
CGCCCTTTTGACCAACCTTGATCCGCACGACGTATTGTTTATCGACGAAATCCACCGGCTAAGCCCCGTCGTCGAGGAAA
TCCTCTATCCCGCGCTCGAAGACTACCGGCTCGACATTATGATAGGCGAAGGACCCGCCGCACGTTCCGTCAAAATCGAC
CTGCCGCCCTTCACCCTCGTCGGCGCGACCACCCGCGCCGGTATGCTGACCAACCCGTTGCGCGACCGCTTCGGCATCGT
CTCCCGCCTCGAGTTTTACGAAAACCGCGACCTTACCACCATCGTCAGCCGTTCGGCACAACTGTTGCAGCTCGATATGG
ACGAAGAAGGCGCGATGGAAGTCGCCAAACGCAGCCGCGGCACGCCCCGCATCGCCAACCGCCTGTTGCGCCGCGTGCGC
GATTTCGCCGACGTGAAAAACAACGGCGTAATCGATGCCGCCGTCGCCGATGCCGCTTTAAGTATGCTGGACGTGGACGC
GCAGGGGCTGGACGTGATGGACAGGAAATTCCTCGAAGCCGTTTTGCACAAATTCGGCGGCGGCCCCGTCGGTTTGGACA
ACGTTGCCGCCGCCATCGGCGAATCTACGGACACCATCGAAGACGTTATCGAACCCTACCTCATCCAACAAGGCTTTTTG
CAACGCACCCCGCGCGGCAGGATGGCGACCGAACGCGCCTACCTGCATTTCGGGCTGCCCGTCGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (268-337)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (32-190)

• RuvB AAA lid domain (AAA_lid_4) (193-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.856	95.335	0.58
ruvB	Streptococcus pneumoniae TIGR4	62.739	91.545	0.574
ruvB	Streptococcus pneumoniae R6	62.739	91.545	0.574
ruvB	Streptococcus pneumoniae D39	62.739	91.545	0.574
ruvB	Synechocystis sp. PCC 6803	54.268	95.627	0.519
ruvB	Helicobacter pylori 26695	56.55	91.254	0.516