Detailed information NTG0185560

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: A6J53_RS11860
• Genome accession: NZ_CP020401
• Coordinates: 1974763..1975794 (+)
• Length: 343 a.a.
• NCBI ID: WP_002256647.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain FDAARGOS_214
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1969763..1980794

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J53_RS11840 (A6J53_11495)	-	1970674..1971048 (-)	375	WP_002222422.1	arsenate reductase	-
A6J53_RS11845 (A6J53_11500)	-	1971198..1972826 (+)	1629	WP_002256644.1	ABC-F family ATPase	-
A6J53_RS11850 (A6J53_11505)	-	1972898..1974151 (+)	1254	WP_002256645.1	multifunctional CCA addition/repair protein	-
A6J53_RS11855 (A6J53_11510)	-	1974373..1974681 (+)	309	WP_002256646.1	hypothetical protein	-
A6J53_RS11860 (A6J53_11515)	ruvB	1974763..1975794 (+)	1032	WP_002256647.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
A6J53_RS11865 (A6J53_11520)	rpe	1975817..1976545 (-)	729	WP_002256648.1	ribulose-phosphate 3-epimerase	-
A6J53_RS11870 (A6J53_11525)	-	1976691..1977125 (+)	435	WP_002229506.1	Spy/CpxP family protein refolding chaperone	-
A6J53_RS11875 (A6J53_11530)	-	1977138..1978001 (-)	864	WP_002256649.1	ATP-binding protein	-
A6J53_RS15460	-	1978009..1978626 (-)	618	WP_002217135.1	riboflavin synthase	-
A6J53_RS15465	-	1978789..1979403 (-)	615	WP_033908737.1	molybdenum cofactor guanylyltransferase	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37650.09 Da
• Isoelectric Point: 5.0462

>NTDB_id=185560 A6J53_RS11860 WP_002256647.1 1974763..1975794(+) (ruvB) [Neisseria meningitidis strain FDAARGOS_214]
MLQTDNLTAAQPQRIVAAQTASAQEELLERAIRPKTLDDYIGQDKAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTL
AHIIAKELGVNLRQTSGPVLERAGDLAALLTNLDSHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGAEEIAKRSRGTPRIANRLLRRVR
DFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFL
QRTPRGRMATERAYLHFGLPVEK

Nucleotide

• Length: 1032 bp

>NTDB_id=185560 A6J53_RS11860 WP_002256647.1 1974763..1975794(+) (ruvB) [Neisseria meningitidis strain FDAARGOS_214]
ATGCTGCAAACCGACAACCTGACCGCCGCGCAACCGCAACGCATCGTTGCCGCCCAAACCGCCTCCGCACAGGAAGAACT
GCTCGAACGCGCCATCCGCCCCAAAACGCTGGACGACTACATCGGGCAAGACAAAGCCAAAGAACAGCTTGCCATTTTCA
TCCAAGCCGCCAAAAAACGCGGCGAAGCACTCGACCACGTTTTGCTCTTCGGCCCGCCCGGACTGGGCAAAACCACACTG
GCGCACATCATCGCCAAAGAATTGGGCGTAAATTTGCGCCAAACCAGCGGCCCCGTCCTCGAACGCGCAGGCGACCTCGC
CGCCCTTTTGACCAACCTTGATTCGCACGATGTATTGTTCATCGACGAAATCCACCGCCTCAGCCCTGTTGTCGAAGAAA
TCCTCTATCCCGCGCTCGAAGACTACCGGCTCGACATTATGATAGGCGAAGGACCCGCCGCCCGTTCCGTCAAAATCGAC
CTGCCGCCCTTCACGCTCATCGGCGCGACCACCCGCGCCGGTATGCTGACCAATCCGTTGCGCGACCGCTTCGGCATCGT
CTCCCGCCTTGAGTTTTACGAAAACCGAGACCTTACCACCATCGTCAGCCGTTCGGCACAACTGTTGCAGCTCGATATGT
CCGAAGAAGGCGCGGAAGAAATCGCCAAACGCAGCCGCGGTACGCCGCGCATCGCCAACCGCCTGTTGCGACGCGTGCGC
GATTTCGCCGACGTGAAAAACAACGGCACAATCGACGGCGGCATCGCCGATGCCGCTTTAAGTATGCTGGACGTGGACGC
GCAGGGGCTGGACGTGATGGACAGGAAATTTCTCGAAGCCGTTTTGCACAAATTCGGCGGCGGCCCGGTCGGTTTGGACA
ACGTTGCCGCCGCCATCGGCGAATCTACAGACACCATCGAAGACGTTATCGAACCCTACCTTATCCAACAAGGCTTCCTG
CAACGCACCCCGCGCGGCAGGATGGCGACCGAACGCGCCTACCTGCATTTCGGGCTGCCCGTCGAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (32-190)

• RuvB C-terminal winged helix domain (WHD_RuvB) (268-337)

• RuvB AAA lid domain (AAA_lid_4) (193-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	62.739	91.545	0.574
ruvB	Streptococcus pneumoniae R6	62.739	91.545	0.574
ruvB	Streptococcus pneumoniae D39	62.739	91.545	0.574
ruvB	Bacillus subtilis subsp. subtilis str. 168	59.939	95.335	0.571
ruvB	Helicobacter pylori 26695	57.188	91.254	0.522
ruvB	Synechocystis sp. PCC 6803	53.963	95.627	0.516