Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FBA2_RS00495 | Genome accession | NZ_CP016028 |
| Coordinates | 92530..93042 (-) | Length | 170 a.a. |
| NCBI ID | WP_004265848.1 | Uniprot ID | A0A0B2XPH3 |
| Organism | Latilactobacillus curvatus strain FBA2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 87530..98042
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FBA2_RS00475 (FBA2_00475) | dnaB | 87991..89394 (-) | 1404 | WP_172821848.1 | replicative DNA helicase | - |
| FBA2_RS00480 (FBA2_00480) | rplI | 89539..89991 (-) | 453 | WP_064776768.1 | 50S ribosomal protein L9 | - |
| FBA2_RS00485 (FBA2_00485) | - | 90013..92043 (-) | 2031 | WP_064776769.1 | DHH family phosphoesterase | - |
| FBA2_RS00490 (FBA2_00490) | rpsR | 92260..92499 (-) | 240 | WP_004265822.1 | 30S ribosomal protein S18 | - |
| FBA2_RS00495 (FBA2_00495) | ssb | 92530..93042 (-) | 513 | WP_004265848.1 | single-stranded DNA-binding protein | Machinery gene |
| FBA2_RS00500 (FBA2_00500) | rpsF | 93082..93378 (-) | 297 | WP_004265809.1 | 30S ribosomal protein S6 | - |
| FBA2_RS00505 (FBA2_00505) | gyrA | 93621..96206 (-) | 2586 | WP_039098084.1 | DNA gyrase subunit A | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18621.16 Da Isoelectric Point: 4.6856
>NTDB_id=185438 FBA2_RS00495 WP_004265848.1 92530..93042(-) (ssb) [Latilactobacillus curvatus strain FBA2]
MINRVVLVGRLTRDVDLRYTSSGAAVGTFSIAVNRQFTNANGDREADFINCVIWRKSAENFANFTKKGSLVGVDGRLQTR
NYENQQGQRVYVTEVVVDNFSLLESRTTTEQRQGDGASQNFNNNQSNGSQQSGFTSPQQSGNPSAANNTQADPFANNGQA
IDISDDDLPF
MINRVVLVGRLTRDVDLRYTSSGAAVGTFSIAVNRQFTNANGDREADFINCVIWRKSAENFANFTKKGSLVGVDGRLQTR
NYENQQGQRVYVTEVVVDNFSLLESRTTTEQRQGDGASQNFNNNQSNGSQQSGFTSPQQSGNPSAANNTQADPFANNGQA
IDISDDDLPF
Nucleotide
Download Length: 513 bp
>NTDB_id=185438 FBA2_RS00495 WP_004265848.1 92530..93042(-) (ssb) [Latilactobacillus curvatus strain FBA2]
ATGATTAATCGAGTTGTACTCGTTGGTCGGCTAACACGCGATGTTGACTTACGTTACACTTCTAGTGGTGCTGCTGTTGG
GACTTTCTCAATCGCAGTGAACCGTCAATTCACGAATGCCAATGGTGATCGTGAAGCAGACTTTATCAACTGTGTCATCT
GGCGTAAATCAGCGGAAAATTTCGCTAATTTCACTAAGAAAGGCTCACTAGTCGGAGTTGATGGCCGTCTACAAACGAGA
AATTATGAAAACCAACAAGGTCAACGTGTATACGTAACCGAAGTGGTCGTTGATAACTTCTCATTGTTAGAATCACGGAC
AACAACGGAGCAACGGCAAGGGGATGGCGCAAGCCAAAACTTTAACAACAATCAAAGCAATGGTAGCCAACAATCTGGAT
TTACCAGCCCTCAACAATCGGGTAATCCATCAGCTGCAAATAACACTCAAGCCGATCCATTTGCAAATAATGGTCAAGCA
ATTGATATTTCAGATGATGATTTACCTTTCTAA
ATGATTAATCGAGTTGTACTCGTTGGTCGGCTAACACGCGATGTTGACTTACGTTACACTTCTAGTGGTGCTGCTGTTGG
GACTTTCTCAATCGCAGTGAACCGTCAATTCACGAATGCCAATGGTGATCGTGAAGCAGACTTTATCAACTGTGTCATCT
GGCGTAAATCAGCGGAAAATTTCGCTAATTTCACTAAGAAAGGCTCACTAGTCGGAGTTGATGGCCGTCTACAAACGAGA
AATTATGAAAACCAACAAGGTCAACGTGTATACGTAACCGAAGTGGTCGTTGATAACTTCTCATTGTTAGAATCACGGAC
AACAACGGAGCAACGGCAAGGGGATGGCGCAAGCCAAAACTTTAACAACAATCAAAGCAATGGTAGCCAACAATCTGGAT
TTACCAGCCCTCAACAATCGGGTAATCCATCAGCTGCAAATAACACTCAAGCCGATCCATTTGCAAATAATGGTCAAGCA
ATTGATATTTCAGATGATGATTTACCTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
97.059 |
100 |
0.971 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56 |
100 |
0.576 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
62.353 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
33.155 |
100 |
0.365 |