Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | A9C19_RS20435 | Genome accession | NZ_CP016020 |
| Coordinates | 4213967..4214491 (+) | Length | 174 a.a. |
| NCBI ID | WP_072581583.1 | Uniprot ID | A0A1L3MWX4 |
| Organism | Bacillus weihaiensis strain Alg07 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4208967..4219491
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9C19_RS20415 (A9C19_20050) | - | 4209519..4209722 (+) | 204 | WP_072581580.1 | DUF951 domain-containing protein | - |
| A9C19_RS20420 (A9C19_20055) | - | 4209741..4211747 (+) | 2007 | WP_072581581.1 | molybdopterin-dependent oxidoreductase | - |
| A9C19_RS20425 (A9C19_20060) | ychF | 4212145..4213245 (+) | 1101 | WP_072581582.1 | redox-regulated ATPase YchF | - |
| A9C19_RS20430 (A9C19_20065) | rpsF | 4213635..4213922 (+) | 288 | WP_072581968.1 | 30S ribosomal protein S6 | - |
| A9C19_RS20435 (A9C19_20070) | ssbA | 4213967..4214491 (+) | 525 | WP_072581583.1 | single-stranded DNA-binding protein | Machinery gene |
| A9C19_RS20440 (A9C19_20075) | rpsR | 4214539..4214778 (+) | 240 | WP_026561616.1 | 30S ribosomal protein S18 | - |
| A9C19_RS20445 (A9C19_20080) | - | 4215068..4216003 (+) | 936 | WP_072581584.1 | YybS family protein | - |
| A9C19_RS20450 (A9C19_20085) | - | 4216040..4218010 (+) | 1971 | WP_072581585.1 | DHH family phosphoesterase | - |
| A9C19_RS20455 (A9C19_20090) | rplI | 4218007..4218453 (+) | 447 | WP_072581586.1 | 50S ribosomal protein L9 | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19176.84 Da Isoelectric Point: 4.7629
>NTDB_id=185333 A9C19_RS20435 WP_072581583.1 4213967..4214491(+) (ssbA) [Bacillus weihaiensis strain Alg07]
MLNRVVLVGRLTKDPDLRYTPSGVAVATFTLAVNRTFTNQQGEREADFLNCVIWRKQAENVANFLKKGSLAGVDGRLQSR
SYEDQTGKRVFVTEVVAESVQFLEPRSASGGGNNNNYNSNNNNNFGGYSDNSGNQNPFGSDQNQQRNQGRTSFDADPFAN
DGKPIDISDDDLPF
MLNRVVLVGRLTKDPDLRYTPSGVAVATFTLAVNRTFTNQQGEREADFLNCVIWRKQAENVANFLKKGSLAGVDGRLQSR
SYEDQTGKRVFVTEVVAESVQFLEPRSASGGGNNNNYNSNNNNNFGGYSDNSGNQNPFGSDQNQQRNQGRTSFDADPFAN
DGKPIDISDDDLPF
Nucleotide
Download Length: 525 bp
>NTDB_id=185333 A9C19_RS20435 WP_072581583.1 4213967..4214491(+) (ssbA) [Bacillus weihaiensis strain Alg07]
ATGTTGAATCGAGTAGTATTAGTCGGAAGACTAACAAAAGATCCAGATCTACGATACACACCAAGTGGAGTAGCAGTTGC
TACATTTACTCTTGCAGTAAACCGAACGTTTACAAATCAACAGGGTGAAAGAGAAGCCGATTTTCTTAACTGTGTGATAT
GGCGTAAACAAGCTGAAAATGTCGCAAACTTCCTTAAAAAAGGTAGTTTAGCTGGTGTTGACGGACGTTTGCAATCACGT
AGCTATGAAGATCAAACAGGCAAACGTGTGTTTGTAACAGAGGTTGTTGCAGAAAGCGTACAGTTCTTAGAGCCTAGATC
AGCAAGCGGCGGCGGTAACAACAATAACTACAATAGCAATAATAATAACAACTTTGGTGGGTACTCAGATAACTCTGGTA
ATCAAAATCCTTTCGGTTCAGATCAAAATCAACAACGTAATCAAGGTCGTACAAGCTTTGATGCAGATCCATTTGCAAAT
GATGGAAAACCTATTGATATATCTGATGACGACTTACCGTTTTAA
ATGTTGAATCGAGTAGTATTAGTCGGAAGACTAACAAAAGATCCAGATCTACGATACACACCAAGTGGAGTAGCAGTTGC
TACATTTACTCTTGCAGTAAACCGAACGTTTACAAATCAACAGGGTGAAAGAGAAGCCGATTTTCTTAACTGTGTGATAT
GGCGTAAACAAGCTGAAAATGTCGCAAACTTCCTTAAAAAAGGTAGTTTAGCTGGTGTTGACGGACGTTTGCAATCACGT
AGCTATGAAGATCAAACAGGCAAACGTGTGTTTGTAACAGAGGTTGTTGCAGAAAGCGTACAGTTCTTAGAGCCTAGATC
AGCAAGCGGCGGCGGTAACAACAATAACTACAATAGCAATAATAATAACAACTTTGGTGGGTACTCAGATAACTCTGGTA
ATCAAAATCCTTTCGGTTCAGATCAAAATCAACAACGTAATCAAGGTCGTACAAGCTTTGATGCAGATCCATTTGCAAAT
GATGGAAAACCTATTGATATATCTGATGACGACTTACCGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
74.857 |
100 |
0.753 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.427 |
100 |
0.598 |
| ssb | Glaesserella parasuis strain SC1401 |
36.813 |
100 |
0.385 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
62.264 |
60.92 |
0.379 |