Detailed information NTG0184975

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: THL1_RS10770
• Genome accession: NZ_CP015992
• Coordinates: 2339460..2341685 (+)
• Length: 741 a.a.
• NCBI ID: WP_069086478.1
• Uniprot ID: -
• Organism: Pseudomonas sp. TCU-HL1 isolate Hualien Taiwan
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2334460..2346685

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
THL1_RS10740 (THL1_2151)	-	2334480..2334770 (-)	291	WP_069083254.1	phosphodiesterase	-
THL1_RS10745 (THL1_2152)	-	2334781..2335365 (-)	585	WP_069083255.1	PilZ domain-containing protein	-
THL1_RS10750 (THL1_2153)	-	2335535..2336785 (+)	1251	WP_069083256.1	lipoprotein-releasing ABC transporter permease subunit	-
THL1_RS10755 (THL1_2154)	lolD	2336778..2337461 (+)	684	WP_069083257.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
THL1_RS10760 (THL1_2155)	-	2337463..2338707 (+)	1245	WP_069083258.1	lipoprotein-releasing ABC transporter permease subunit	-
THL1_RS10765 (THL1_2156)	-	2338758..2339285 (-)	528	WP_069083259.1	DUF2062 domain-containing protein	-
THL1_RS10770 (THL1_2157)	comA	2339460..2341685 (+)	2226	WP_069086478.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
THL1_RS10775 (THL1_2158)	exbB	2341757..2342392 (+)	636	WP_069083260.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
THL1_RS10780 (THL1_2159)	-	2342389..2342835 (+)	447	WP_069083261.1	ExbD/TolR family protein	-
THL1_RS10785 (THL1_2160)	lpxK	2342835..2343839 (+)	1005	WP_069083262.1	tetraacyldisaccharide 4'-kinase	-
THL1_RS10790 (THL1_2161)	-	2343878..2344063 (+)	186	WP_069083263.1	Trm112 family protein	-
THL1_RS10795 (THL1_2162)	kdsB	2344060..2344824 (+)	765	WP_069083264.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
THL1_RS10800 (THL1_2163)	-	2344824..2345288 (+)	465	WP_069083265.1	low molecular weight protein-tyrosine-phosphatase	-
THL1_RS10805 (THL1_2164)	murB	2345285..2346304 (+)	1020	WP_069083266.1	UDP-N-acetylmuramate dehydrogenase	-
THL1_RS10810 (THL1_2165)	-	2346364..2346645 (-)	282	WP_069083267.1	pyrimidine/purine nucleoside phosphorylase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80270.52 Da
• Isoelectric Point: 10.3484

>NTDB_id=184975 THL1_RS10770 WP_069086478.1 2339460..2341685(+) (comA) [Pseudomonas sp. TCU-HL1 isolate Hualien Taiwan]
MLSGLAALAAGLLALRWMPALPPVWWLYLLLAVGLLLLGGRAWRAGFFLVGLGWACLSAQWALDDRLALELDGQVRWLEG
RVVGLPSVADGVVRFELDELHSARARLPKRLRLSWYGGPPMLAGERWRLAVRLKRPHGLVNPATFDYEAWLLARRTGGTG
SVRTGERLEPAGGLYAWRDELRQRLLQVDAWGRAGGLAALVLGDGSGLTNRDWRLLQDTGTTHLMVISGQHITLFAGVLY
GLVAALARLGLWPRRLPWLPSACTLALVGGVGYGLLAGFDVPVQRACVMLAVVLLWRLRFRHLGFLTPLMVALCAVLLAE
PLVVLQPGFWLSFGAVLLLVFCFAGRLGTWAWWQSWWRAQWAMGLGLAPILLALALPISLSGPLANLVAVPWISLVVLPL
ALLGTLLLPVPLLGEALLWLSGGALELLFRGLAWTAMQLPAWIPAQVPGWAWLLSALGTLLLMAPAGVPLRSFGFALLLP
MLMPLLARPAPGQAEVWVFDVGQGLSVLIRTREHALLYDAGPRRGDFDIGERVVVPALRGLGLSRLDLMLISHADSDHAG
GALAVQRGLAVARVMSGEPGRLPPDLNAQPCAVGDAWSWDGVRFLVWKSPVAGDSNERSCVLAVEAAGERILLSGDLGTR
GEAAWVASGQPLAARWLVAGHHGSRTSSSPAFLRAVQPQKVVISRGHLNSYGHPHPLVVSRIRGLPAEIHDTAEQGALLL
RLGAHVEPESWREKSVFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=184975 THL1_RS10770 WP_069086478.1 2339460..2341685(+) (comA) [Pseudomonas sp. TCU-HL1 isolate Hualien Taiwan]
ATGTTGTCCGGGCTGGCCGCACTGGCGGCTGGCTTGCTTGCGCTGCGCTGGATGCCCGCCTTGCCGCCTGTCTGGTGGCT
CTATCTCCTGCTGGCCGTCGGTCTGCTCCTGCTGGGCGGGCGGGCGTGGCGCGCTGGCTTTTTCCTGGTCGGCCTTGGCT
GGGCGTGCCTGAGTGCCCAGTGGGCGCTCGATGATCGATTGGCACTGGAGCTGGATGGACAGGTGCGCTGGCTGGAGGGG
CGGGTGGTCGGCTTGCCGAGCGTCGCCGACGGCGTGGTGCGATTCGAGCTGGATGAGCTCCACTCCGCGCGGGCGCGATT
GCCCAAGCGCCTGCGCCTGTCCTGGTATGGCGGGCCGCCGATGCTGGCTGGCGAACGCTGGCGACTGGCGGTGCGTCTGA
AACGGCCTCATGGACTGGTGAACCCCGCCACCTTCGATTACGAGGCCTGGTTGCTGGCGCGGCGCACGGGCGGCACCGGT
TCGGTGAGAACCGGTGAGCGCCTCGAACCGGCTGGCGGGCTTTACGCCTGGCGCGACGAGCTTCGCCAACGGTTGCTGCA
GGTCGATGCGTGGGGGAGGGCAGGAGGCCTCGCCGCGTTGGTGCTGGGGGACGGATCGGGCTTGACGAACAGGGACTGGC
GCCTGCTTCAAGACACCGGTACGACGCATTTGATGGTTATCTCCGGCCAGCACATCACCTTGTTCGCCGGGGTGCTCTAT
GGCCTGGTGGCGGCCCTGGCGCGCCTGGGGCTCTGGCCGCGGCGCCTGCCGTGGTTGCCCAGTGCTTGCACCCTGGCCTT
GGTGGGCGGTGTCGGCTACGGCCTTCTCGCCGGTTTCGATGTGCCGGTGCAGCGGGCCTGCGTGATGCTCGCCGTTGTCC
TGCTCTGGCGTCTGCGGTTTCGTCACCTGGGGTTCCTTACGCCGCTGATGGTCGCGCTCTGTGCCGTGCTTCTGGCTGAG
CCGCTGGTGGTTCTGCAGCCTGGATTCTGGTTGTCGTTCGGCGCCGTCCTGCTGCTGGTCTTCTGTTTCGCCGGACGCCT
TGGCACCTGGGCCTGGTGGCAGTCCTGGTGGCGAGCCCAGTGGGCCATGGGCTTGGGGCTGGCACCGATACTGCTGGCCC
TGGCCCTGCCCATCAGCCTGAGTGGACCGCTGGCGAATCTGGTGGCGGTGCCCTGGATCAGTCTGGTGGTACTTCCTCTC
GCCCTGCTTGGAACCCTGCTGCTGCCTGTTCCGTTGCTGGGTGAAGCGCTGCTCTGGCTTTCCGGGGGAGCGTTGGAACT
CCTGTTTCGCGGGCTTGCCTGGACTGCCATGCAGTTGCCTGCCTGGATTCCAGCGCAGGTGCCAGGCTGGGCCTGGCTGC
TGAGCGCGCTGGGTACGCTGCTGTTGATGGCGCCGGCGGGAGTGCCGCTACGCTCATTCGGCTTCGCATTGCTGCTGCCC
ATGCTGATGCCGCTGCTGGCGCGTCCCGCCCCCGGGCAGGCTGAGGTCTGGGTGTTCGACGTGGGGCAGGGGCTTTCGGT
GCTGATACGCACCCGCGAGCATGCGTTGCTCTACGACGCCGGTCCGCGTCGGGGGGATTTCGACATCGGCGAGCGGGTGG
TGGTGCCGGCATTGCGCGGCCTGGGTCTGTCCAGGCTCGACCTGATGCTGATCAGCCATGCGGACTCCGATCATGCTGGC
GGCGCCCTGGCCGTGCAGCGAGGGCTGGCGGTGGCGCGGGTCATGAGCGGGGAGCCGGGTCGCCTGCCGCCCGATCTGAA
TGCGCAACCCTGCGCAGTGGGTGATGCCTGGAGCTGGGATGGGGTGCGGTTCCTTGTCTGGAAGTCGCCCGTAGCGGGAG
ACAGCAATGAGCGTTCCTGTGTGCTGGCCGTCGAGGCCGCAGGTGAGCGCATCCTGCTCAGTGGCGACCTTGGCACGCGC
GGCGAAGCGGCCTGGGTCGCCAGCGGGCAGCCGCTCGCGGCGCGCTGGCTGGTGGCTGGGCATCATGGTAGCCGCACCTC
CTCCAGCCCCGCCTTCCTGCGAGCCGTTCAGCCACAAAAAGTGGTGATCTCCCGGGGGCACCTCAATTCGTACGGGCATC
CACACCCGCTGGTCGTTTCGCGTATCCGCGGTTTGCCCGCCGAGATTCATGACACGGCGGAGCAGGGCGCTTTGCTGCTG
CGGCTGGGGGCTCATGTCGAGCCGGAAAGCTGGCGAGAAAAGTCCGTGTTCTGGAGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-687)

• Competence protein (Competence) (200-464)

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.691	97.301	0.61
comA	Ralstonia pseudosolanacearum GMI1000	36.131	100	0.401