Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   A9E86_RS03995 Genome accession   NZ_CP015944
Coordinates   905591..905908 (+) Length   105 a.a.
NCBI ID   WP_010946546.1    Uniprot ID   Q5ZXC2
Organism   Legionella pneumophila strain C10_S     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 900591..910908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9E86_RS03975 (A9E86_03975) - 900743..902182 (+) 1440 WP_010946542.1 cation:proton antiporter -
  A9E86_RS03980 (A9E86_03980) nadC 902179..903021 (+) 843 WP_010946543.1 carboxylating nicotinate-nucleotide diphosphorylase -
  A9E86_RS03985 (A9E86_03985) - 903018..904109 (+) 1092 WP_010946544.1 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase -
  A9E86_RS03990 (A9E86_03990) - 904084..905499 (+) 1416 WP_010946545.1 M20 family metallopeptidase -
  A9E86_RS03995 (A9E86_03995) comEA 905591..905908 (+) 318 WP_010946546.1 helix-hairpin-helix domain-containing protein Machinery gene
  A9E86_RS04000 (A9E86_04000) - 906104..907141 (+) 1038 WP_011213320.1 rod shape-determining protein -
  A9E86_RS04005 (A9E86_04005) mreC 907119..908027 (+) 909 WP_010946548.1 rod shape-determining protein MreC -
  A9E86_RS04010 (A9E86_04010) mreD 908024..908503 (+) 480 WP_010946549.1 rod shape-determining protein MreD -
  A9E86_RS04015 (A9E86_04015) - 908439..909041 (-) 603 WP_011213321.1 pseudouridine synthase -
  A9E86_RS04020 (A9E86_04020) - 909302..910000 (+) 699 WP_010946551.1 hypothetical protein -

Sequence


Protein


Download         Length: 105 a.a.        Molecular weight: 11773.78 Da        Isoelectric Point: 10.5233

>NTDB_id=184290 A9E86_RS03995 WP_010946546.1 905591..905908(+) (comEA) [Legionella pneumophila strain C10_S]
MKARLIAILLSFIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVYSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN

Nucleotide


Download         Length: 318 bp        

>NTDB_id=184290 A9E86_RS03995 WP_010946546.1 905591..905908(+) (comEA) [Legionella pneumophila strain C10_S]
ATGAAAGCAAGACTCATTGCTATTTTATTGTCATTTATTGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTTAATACAGCGGATGTGTATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGGGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGGTTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA

Domains


Predicted by InterproScan.

(37-98)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5ZXC2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Legionella pneumophila str. Paris

100

100

1

  comEA Legionella pneumophila strain ERS1305867

100

100

1

  comE1/comEA Haemophilus influenzae Rd KW20

35.455

100

0.371

  comEA Staphylococcus aureus N315

38.384

94.286

0.362

  comEA Staphylococcus aureus MW2

38.384

94.286

0.362


Multiple sequence alignment