Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   BV131_RS06270 Genome accession   NZ_CP020010
Coordinates   1252130..1253122 (-) Length   330 a.a.
NCBI ID   WP_005670642.1    Uniprot ID   -
Organism   Haemophilus influenzae strain 67P38H1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1247130..1258122
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV131_RS06240 (BV131_1257) artQ 1247256..1247921 (-) 666 WP_005670662.1 arginine ABC transporter permease ArtQ -
  BV131_RS06245 (BV131_1258) - 1247925..1248644 (-) 720 WP_050822882.1 lysine/arginine/ornithine ABC transporter substrate-binding protein -
  BV131_RS06250 (BV131_1259) artP 1248662..1249393 (-) 732 WP_050822881.1 arginine ABC transporter ATP-binding protein ArtP -
  BV131_RS06255 (BV131_1260) lpcA 1249519..1250103 (-) 585 WP_005663828.1 D-sedoheptulose 7-phosphate isomerase -
  BV131_RS06260 (BV131_1262) - 1250309..1251115 (+) 807 WP_042593811.1 DNA ligase -
  BV131_RS06265 (BV131_1263) - 1251144..1252127 (-) 984 WP_005657163.1 peptide ABC transporter ATP-binding protein -
  BV131_RS06270 (BV131_1264) amiE 1252130..1253122 (-) 993 WP_005670642.1 dipeptide ABC transporter ATP-binding protein Regulator
  BV131_RS06275 (BV131_1265) - 1253132..1254019 (-) 888 WP_021035439.1 ABC transporter permease subunit -
  BV131_RS06280 (BV131_1266) - 1254034..1255035 (-) 1002 WP_050822880.1 ABC transporter permease subunit -
  BV131_RS06285 (BV131_1268) uvrD 1255125..1257305 (-) 2181 WP_005670633.1 DNA helicase II -
  BV131_RS09205 - 1257283..1257669 (-) 387 WP_233994524.1 branched-chain amino acid aminotransferase -

Sequence


Protein


Download         Length: 330 a.a.        Molecular weight: 36314.07 Da        Isoelectric Point: 6.5836

>NTDB_id=183239 BV131_RS06270 WP_005670642.1 1252130..1253122(-) (amiE) [Haemophilus influenzae strain 67P38H1]
MALLDVKELSVHFGDKKTPFKAVDRISYQVAQGEVLGIVGESGSGKSVSSLAIMGLIDHPGRVSAESLQFENTDLLTLES
KAKRQLIGADVAMIFQDPMTSLNPAYTVGFQIMEALKTHEGGTKKARKDRTLELLKLVGIPDPESRIDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIMELLLELQKKECMSLILITHDLALVAEAADRIIVMYAGQIVEEGTAKD
IFREPKHPYTQALLRSLPEFAEGKSRLESLQGVVPGKYDRPTGCLLNPRCPYATEYCRQVEPQLHHIGSRKVKCHTPLNE
QGNPVEYQGA

Nucleotide


Download         Length: 993 bp        

>NTDB_id=183239 BV131_RS06270 WP_005670642.1 1252130..1253122(-) (amiE) [Haemophilus influenzae strain 67P38H1]
ATGGCATTATTAGACGTAAAAGAACTTTCTGTTCACTTTGGCGATAAAAAAACGCCATTTAAAGCAGTGGATCGCATTAG
CTATCAAGTCGCACAAGGCGAAGTGCTTGGCATTGTAGGAGAATCAGGCTCAGGTAAATCTGTGAGTTCTCTCGCAATTA
TGGGATTAATTGATCATCCTGGACGTGTATCGGCTGAATCCTTGCAATTTGAAAATACTGATTTACTCACTTTAGAGAGT
AAAGCCAAACGCCAGCTTATTGGTGCTGATGTTGCGATGATTTTCCAAGATCCGATGACAAGTTTGAATCCTGCTTATAC
TGTGGGTTTCCAAATTATGGAAGCGTTAAAAACTCACGAGGGCGGCACAAAAAAGGCGAGAAAAGACCGCACTTTAGAGC
TTTTAAAATTGGTCGGTATTCCTGATCCTGAATCTCGGATTGATGTTTATCCTCATCAGCTTTCTGGCGGAATGAGTCAG
CGCGTGATGATTGCGATGGCAATTGCTTGCAGACCTAAATTATTGATTGCTGATGAGCCAACCACGGCATTGGACGTGAC
TATTCAAGCACAAATTATGGAACTCTTACTCGAATTGCAGAAAAAAGAATGCATGTCGCTGATTTTGATTACCCATGATC
TTGCGCTTGTTGCTGAAGCGGCAGATCGAATTATCGTGATGTATGCTGGACAAATCGTTGAAGAAGGCACCGCAAAAGAT
ATTTTCCGCGAGCCAAAACACCCTTACACACAAGCCTTATTACGTTCATTACCTGAATTTGCAGAGGGAAAATCTCGCTT
AGAATCATTACAAGGGGTCGTCCCTGGAAAATACGATCGCCCAACAGGCTGTTTATTAAATCCTCGCTGCCCTTATGCCA
CCGAATATTGTCGCCAAGTTGAACCTCAATTGCATCATATCGGTTCGCGTAAAGTAAAATGCCATACTCCACTGAACGAG
CAAGGCAATCCAGTTGAATATCAAGGAGCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

46.599

89.091

0.415

  amiE Streptococcus thermophilus LMG 18311

46.918

88.485

0.415

  amiE Streptococcus thermophilus LMD-9

46.918

88.485

0.415

  oppD Streptococcus mutans UA159

45.333

90.909

0.412


Multiple sequence alignment