Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | LLJM2_RS11585 | Genome accession | NZ_CP015900 |
| Coordinates | 2252864..2253364 (-) | Length | 166 a.a. |
| NCBI ID | WP_011677241.1 | Uniprot ID | A0A0M2ZSZ2 |
| Organism | Lactococcus cremoris strain JM2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2247864..2258364
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLJM2_RS11560 (LLJM2_2264) | gnd | 2248989..2249894 (-) | 906 | WP_162494692.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| LLJM2_RS11565 (LLJM2_2265) | - | 2250263..2251111 (+) | 849 | WP_011677238.1 | MurR/RpiR family transcriptional regulator | - |
| LLJM2_RS11570 (LLJM2_2266) | - | 2251150..2251458 (+) | 309 | WP_011836103.1 | DUF960 domain-containing protein | - |
| LLJM2_RS11575 (LLJM2_2267) | - | 2251531..2252316 (-) | 786 | WP_021164832.1 | metallophosphoesterase | - |
| LLJM2_RS11580 (LLJM2_2268) | rpsR | 2252447..2252692 (-) | 246 | WP_003131952.1 | 30S ribosomal protein S18 | - |
| LLJM2_RS11585 (LLJM2_2269) | ssb | 2252864..2253364 (-) | 501 | WP_011677241.1 | single-stranded DNA-binding protein | Machinery gene |
| LLJM2_RS11590 (LLJM2_2270) | rpsF | 2253394..2253687 (-) | 294 | WP_011677242.1 | 30S ribosomal protein S6 | - |
| LLJM2_RS11595 (LLJM2_2271) | - | 2253881..2254735 (-) | 855 | WP_021164831.1 | undecaprenyl-diphosphate phosphatase | - |
| LLJM2_RS11600 (LLJM2_2272) | - | 2255257..2256723 (+) | 1467 | WP_162494684.1 | amino acid permease | - |
Sequence
Protein
Download Length: 166 a.a. Molecular weight: 18233.05 Da Isoelectric Point: 5.2166
>NTDB_id=183005 LLJM2_RS11585 WP_011677241.1 2252864..2253364(-) (ssb) [Lactococcus cremoris strain JM2]
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADSFQMLESRSARDGMGGGASAGSYSAPSQSTNNTPRPQTNNNSATPNFGRDADPFGSSPMEIS
DDDLPF
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADSFQMLESRSARDGMGGGASAGSYSAPSQSTNNTPRPQTNNNSATPNFGRDADPFGSSPMEIS
DDDLPF
Nucleotide
Download Length: 501 bp
>NTDB_id=183005 LLJM2_RS11585 WP_011677241.1 2252864..2253364(-) (ssb) [Lactococcus cremoris strain JM2]
ATGATTAACAATGTTGTATTAGTGGGACGCATTACTCGCGATCCTGAACTTCGTTACACCCCTCAAAATCAAGCTGTTGC
TACTTTTTCATTGGCTGTAAATCGTCAATTTAAAAATGCTAACGGTGAACGTGAGGCTGATTTCATTAACTGCGTTATTT
GGCGCCAACAAGCTGAAAATTTGGCAAATTGGGCTAAAAAAGGAGCTTTGATCGGTGTAACTGGTCGAATTCAAACACGT
AATTATGAAAATCAACAAGGTCAACGCGTTTATGTGACTGAGGTTGTGGCTGATAGTTTCCAAATGTTGGAAAGTAGATC
TGCTCGCGATGGTATGGGAGGCGGAGCTTCTGCCGGTTCATATTCTGCACCAAGCCAATCTACAAATAATACTCCACGTC
CACAAACGAATAATAATAGTGCAACACCGAATTTCGGTCGTGATGCTGACCCATTTGGTAGCTCACCTATGGAAATCTCG
GATGATGACCTTCCATTCTAA
ATGATTAACAATGTTGTATTAGTGGGACGCATTACTCGCGATCCTGAACTTCGTTACACCCCTCAAAATCAAGCTGTTGC
TACTTTTTCATTGGCTGTAAATCGTCAATTTAAAAATGCTAACGGTGAACGTGAGGCTGATTTCATTAACTGCGTTATTT
GGCGCCAACAAGCTGAAAATTTGGCAAATTGGGCTAAAAAAGGAGCTTTGATCGGTGTAACTGGTCGAATTCAAACACGT
AATTATGAAAATCAACAAGGTCAACGCGTTTATGTGACTGAGGTTGTGGCTGATAGTTTCCAAATGTTGGAAAGTAGATC
TGCTCGCGATGGTATGGGAGGCGGAGCTTCTGCCGGTTCATATTCTGCACCAAGCCAATCTACAAATAATACTCCACGTC
CACAAACGAATAATAATAGTGCAACACCGAATTTCGGTCGTGATGCTGACCCATTTGGTAGCTCACCTATGGAAATCTCG
GATGATGACCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.62 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.395 |
100 |
0.584 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.855 |
0.373 |
| ssb | Glaesserella parasuis strain SC1401 |
33.898 |
100 |
0.361 |