Detailed information NTG0182980

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LLJM2_RS09010
• Genome accession: NZ_CP015900
• Coordinates: 1758257..1759240 (-)
• Length: 327 a.a.
• NCBI ID: WP_032950503.1
• Uniprot ID: A0A1V0PIB8
• Organism: Lactococcus cremoris strain JM2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1753257..1764240

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLJM2_RS08995 (LLJM2_1768)	-	1754609..1755535 (-)	927	WP_032950507.1	peptidyl-prolyl cis-trans isomerase	-
LLJM2_RS09000 (LLJM2_1769)	-	1755691..1756374 (-)	684	WP_011676723.1	O-methyltransferase	-
LLJM2_RS09005 (LLJM2_1770)	pepF	1756377..1758182 (-)	1806	WP_081196818.1	oligoendopeptidase F	Regulator
LLJM2_RS09010 (LLJM2_1771)	coiA	1758257..1759240 (-)	984	WP_032950503.1	competence protein CoiA	Machinery gene
LLJM2_RS09015 (LLJM2_1772)	-	1759315..1760400 (-)	1086	WP_081196819.1	YdcF family protein	-
LLJM2_RS09020 (LLJM2_1773)	-	1760554..1761141 (-)	588	WP_014572239.1	alpha/beta hydrolase	-
LLJM2_RS09025 (LLJM2_1774)	-	1761180..1761416 (-)	237	WP_250638220.1	alpha/beta hydrolase	-
LLJM2_RS09030 (LLJM2_1775)	-	1761609..1763030 (-)	1422	WP_011676727.1	NCS2 family permease	-
LLJM2_RS09035 (LLJM2_1776)	-	1763337..1764173 (+)	837	WP_011676728.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 39121.86 Da
• Isoelectric Point: 9.7664

>NTDB_id=182980 LLJM2_RS09010 WP_032950503.1 1758257..1759240(-) (coiA) [Lactococcus cremoris strain JM2]
MLTAIDENNKIINLLELERKELTGKFYCPSCHAELLIKNGQIKVLHFAHKSLKSCNLWLENESEQHLGLKKILYQWFKRT
DKVEIERYLPELNQRPDLLVNDKIAIEIQCSHLSIKRLKERTENYKAHGFKVLWLMGKDLWLAEQVTKLQKNLVYFSENR
GFFYWELDFQRKKLRLKSLIHEDLRGRIICLQEEIPFGKGRLIAHLRLPYLAQKLVKIPTFKDPKLSSFIRQQLYYQSPK
WMKIQEKYYQKGENLLTKKFEGPYIAPLGLNLLESFTDEMTITTFTQIDQNVKLYYENFLINFQRNSLEMLYPPCFYAIM
GKQKKEK

Nucleotide

• Length: 984 bp

>NTDB_id=182980 LLJM2_RS09010 WP_032950503.1 1758257..1759240(-) (coiA) [Lactococcus cremoris strain JM2]
ATGCTGACAGCAATTGATGAAAATAATAAAATAATAAACTTACTGGAATTAGAACGCAAAGAATTGACCGGGAAATTTTA
TTGTCCTTCTTGTCATGCAGAGCTACTTATTAAAAATGGGCAGATAAAAGTTCTTCATTTTGCCCATAAATCTCTAAAGA
GCTGCAATTTATGGTTGGAAAATGAGTCAGAACAGCATTTAGGTTTGAAAAAAATATTATATCAGTGGTTTAAAAGGACT
GACAAAGTCGAAATTGAACGCTATTTGCCCGAACTTAACCAAAGACCAGATTTATTAGTAAATGACAAAATCGCTATTGA
GATACAATGCTCTCATTTATCTATTAAGCGCCTCAAAGAACGTACAGAAAATTATAAGGCGCATGGCTTTAAAGTGCTTT
GGTTGATGGGAAAGGATTTATGGCTGGCTGAACAGGTGACAAAACTTCAAAAAAATTTAGTTTATTTCTCGGAAAATAGA
GGATTCTTTTATTGGGAGTTAGATTTTCAGAGGAAAAAATTAAGATTAAAATCTCTTATTCATGAGGATTTACGCGGCAG
AATCATTTGCTTACAAGAGGAAATTCCTTTTGGAAAAGGACGACTTATTGCGCATCTACGCTTACCTTATTTGGCGCAAA
AACTGGTGAAAATTCCTACTTTTAAAGATCCTAAACTTTCTAGTTTTATTCGTCAGCAATTATACTATCAATCACCAAAA
TGGATGAAAATTCAAGAAAAATATTATCAAAAAGGAGAAAATTTACTGACGAAAAAATTTGAAGGTCCATACATTGCTCC
ACTAGGTTTAAATTTACTAGAGAGTTTTACTGACGAAATGACGATCACAACTTTTACTCAGATTGATCAAAATGTTAAGC
TTTACTATGAAAATTTTTTAATAAATTTCCAAAGAAATAGCCTTGAAATGCTCTATCCTCCCTGTTTCTATGCTATAATG
GGAAAGCAGAAGAAGGAAAAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-254)

3D structure

• AlphaFold DB: A0A1V0PIB8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Lactococcus lactis subsp. cremoris KW2	97.248	100	0.972
coiA	Streptococcus mitis NCTC 12261	44.444	99.083	0.44
coiA	Streptococcus pneumoniae TIGR4	43.21	99.083	0.428
coiA	Streptococcus pneumoniae Rx1	43.21	99.083	0.428
coiA	Streptococcus pneumoniae D39	43.21	99.083	0.428
coiA	Streptococcus pneumoniae R6	43.21	99.083	0.428