Detailed information NTG0182940

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LLJM1_RS08625
• Genome accession: NZ_CP015899
• Coordinates: 1643768..1644751 (-)
• Length: 327 a.a.
• NCBI ID: WP_032950503.1
• Uniprot ID: A0A1V0PIB8
• Organism: Lactococcus cremoris strain JM1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1638768..1649751

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLJM1_RS08610 (LLJM1_1662)	-	1640120..1641046 (-)	927	WP_032950507.1	peptidyl-prolyl cis-trans isomerase	-
LLJM1_RS08615 (LLJM1_1663)	-	1641202..1641885 (-)	684	WP_011676723.1	O-methyltransferase	-
LLJM1_RS08620 (LLJM1_1664)	pepF	1641888..1643693 (-)	1806	WP_032950505.1	oligoendopeptidase F	Regulator
LLJM1_RS08625 (LLJM1_1665)	coiA	1643768..1644751 (-)	984	WP_032950503.1	competence protein CoiA	Machinery gene
LLJM1_RS08630 (LLJM1_1666)	-	1644826..1645911 (-)	1086	WP_014572240.1	YdcF family protein	-
LLJM1_RS08635 (LLJM1_1667)	-	1646072..1647247 (+)	1176	WP_003138385.1	IS256-like element IS905 family transposase	-
LLJM1_RS08640 (LLJM1_1668)	-	1647386..1647973 (-)	588	WP_250638196.1	alpha/beta hydrolase	-
LLJM1_RS08645 (LLJM1_1669)	-	1648012..1648209 (-)	198	WP_250638141.1	alpha/beta hydrolase	-
LLJM1_RS08650 (LLJM1_1670)	-	1648331..1649266 (-)	936	WP_031559015.1	IS30 family transposase	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 39121.86 Da
• Isoelectric Point: 9.7664

>NTDB_id=182940 LLJM1_RS08625 WP_032950503.1 1643768..1644751(-) (coiA) [Lactococcus cremoris strain JM1]
MLTAIDENNKIINLLELERKELTGKFYCPSCHAELLIKNGQIKVLHFAHKSLKSCNLWLENESEQHLGLKKILYQWFKRT
DKVEIERYLPELNQRPDLLVNDKIAIEIQCSHLSIKRLKERTENYKAHGFKVLWLMGKDLWLAEQVTKLQKNLVYFSENR
GFFYWELDFQRKKLRLKSLIHEDLRGRIICLQEEIPFGKGRLIAHLRLPYLAQKLVKIPTFKDPKLSSFIRQQLYYQSPK
WMKIQEKYYQKGENLLTKKFEGPYIAPLGLNLLESFTDEMTITTFTQIDQNVKLYYENFLINFQRNSLEMLYPPCFYAIM
GKQKKEK

Nucleotide

• Length: 984 bp

>NTDB_id=182940 LLJM1_RS08625 WP_032950503.1 1643768..1644751(-) (coiA) [Lactococcus cremoris strain JM1]
ATGCTGACAGCAATTGATGAAAATAATAAAATAATAAACTTACTGGAATTAGAACGCAAAGAATTGACCGGGAAATTTTA
TTGTCCTTCTTGTCATGCAGAGCTACTTATTAAAAATGGGCAGATAAAAGTTCTTCATTTTGCCCATAAATCTCTAAAGA
GCTGCAATTTATGGTTGGAAAATGAGTCAGAACAGCATTTAGGTTTGAAAAAAATATTATATCAGTGGTTTAAAAGGACT
GACAAAGTCGAAATTGAACGCTATTTGCCCGAACTTAACCAAAGACCAGATTTATTAGTAAATGACAAAATCGCTATTGA
GATACAATGCTCTCATTTATCTATTAAGCGCCTCAAAGAACGTACAGAAAATTATAAGGCGCATGGCTTTAAAGTGCTTT
GGTTGATGGGAAAGGATTTATGGCTGGCTGAACAGGTGACAAAACTTCAAAAAAATTTAGTTTATTTCTCGGAAAATAGA
GGATTCTTTTATTGGGAGTTAGATTTTCAGAGGAAAAAATTAAGATTAAAATCTCTTATTCATGAGGATTTACGCGGCAG
AATCATTTGCTTACAAGAGGAAATTCCTTTTGGAAAAGGACGACTTATTGCGCATCTACGCTTACCTTATTTGGCGCAAA
AACTGGTGAAAATTCCTACTTTTAAAGATCCTAAACTTTCTAGTTTTATTCGTCAGCAATTATACTATCAATCACCAAAA
TGGATGAAAATTCAAGAAAAATATTATCAAAAAGGAGAAAATTTACTGACGAAAAAATTTGAAGGTCCATACATTGCTCC
ACTAGGTTTAAATTTACTAGAGAGTTTTACTGACGAAATGACGATCACAACTTTTACTCAGATTGATCAAAATGTTAAGC
TTTACTATGAAAATTTTTTAATAAATTTCCAAAGAAATAGCCTTGAAATGCTCTATCCTCCCTGTTTCTATGCTATAATG
GGAAAGCAGAAGAAGGAAAAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-254)

3D structure

• AlphaFold DB: A0A1V0PIB8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Lactococcus lactis subsp. cremoris KW2	97.248	100	0.972
coiA	Streptococcus mitis NCTC 12261	44.444	99.083	0.44
coiA	Streptococcus pneumoniae TIGR4	43.21	99.083	0.428
coiA	Streptococcus pneumoniae Rx1	43.21	99.083	0.428
coiA	Streptococcus pneumoniae D39	43.21	99.083	0.428
coiA	Streptococcus pneumoniae R6	43.21	99.083	0.428