Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | A8L59_RS23580 | Genome accession | NZ_CP015852 |
| Coordinates | 5261491..5262009 (-) | Length | 172 a.a. |
| NCBI ID | WP_007966163.1 | Uniprot ID | A0A031FLF5 |
| Organism | Pseudomonas koreensis strain CRS05-R5 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5256491..5267009
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8L59_RS23550 (A8L59_23525) | - | 5256873..5257541 (+) | 669 | WP_041074461.1 | YjfI family protein | - |
| A8L59_RS23555 (A8L59_23530) | - | 5257559..5258257 (+) | 699 | WP_003228700.1 | PspA/IM30 family protein | - |
| A8L59_RS23560 (A8L59_23535) | - | 5258460..5259107 (+) | 648 | WP_064589455.1 | DUF2491 family protein | - |
| A8L59_RS23565 (A8L59_23540) | - | 5259122..5259547 (+) | 426 | WP_064589456.1 | DUF350 domain-containing protein | - |
| A8L59_RS23570 (A8L59_23545) | - | 5259565..5260254 (+) | 690 | WP_064589457.1 | DUF1190 domain-containing protein | - |
| A8L59_RS23575 (A8L59_23550) | - | 5260257..5261414 (+) | 1158 | WP_064589458.1 | glutathionylspermidine synthase family protein | - |
| A8L59_RS23580 (A8L59_23555) | ssb | 5261491..5262009 (-) | 519 | WP_007966163.1 | single-stranded DNA-binding protein | Machinery gene |
| A8L59_RS23585 (A8L59_23560) | - | 5262019..5263416 (-) | 1398 | WP_064589459.1 | MFS transporter | - |
| A8L59_RS23590 (A8L59_23565) | uvrA | 5263607..5266441 (+) | 2835 | WP_064589460.1 | excinuclease ABC subunit UvrA | - |
| A8L59_RS23595 (A8L59_23570) | bfr | 5266505..5266969 (-) | 465 | WP_003228714.1 | bacterioferritin | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19125.28 Da Isoelectric Point: 5.9314
>NTDB_id=182511 A8L59_RS23580 WP_007966163.1 5261491..5262009(-) (ssb) [Pseudomonas koreensis strain CRS05-R5]
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQQGDQQGGGNNYQQQAPRQQAPRPQQSAPQQRPAPAPQQAAPQPA
PDFDSFDDDIPF
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQQGDQQGGGNNYQQQAPRQQAPRPQQSAPQQRPAPAPQQAAPQPA
PDFDSFDDDIPF
Nucleotide
Download Length: 519 bp
>NTDB_id=182511 A8L59_RS23580 WP_007966163.1 5261491..5262009(-) (ssb) [Pseudomonas koreensis strain CRS05-R5]
ATGGCCCGTGGGGTTAACAAAGTCATATTGGTCGGCACTTGCGGCCAGGATCCCGAAGTTCGCTACCTGCCTAACGGTAA
CGCCGTGACCAACCTGAGTCTGGCAACCAGCGAACAGTGGACCGACAAGCAAACCGGTCAGAAGGTCGAGAAGACCGAAT
GGCACCGTGTTTCGATGTTCGGCAAGGTTGCGGAAATCGCCGGCGAATACCTGCGTAAAGGTTCGCAGGTGTACATCGAA
GGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGTATCAAGCGTTACACCACCGAAATCGTGGTCGACATGCAAGGCAC
CATGCAACTGCTCGGCGGCCGTCCTCAACAGGGCGATCAACAAGGCGGTGGCAACAACTACCAGCAGCAGGCACCACGCC
AGCAGGCTCCACGCCCGCAGCAGTCGGCTCCGCAACAGCGCCCGGCACCCGCTCCACAGCAAGCCGCGCCGCAACCGGCT
CCGGATTTCGACAGCTTCGATGACGATATTCCGTTCTGA
ATGGCCCGTGGGGTTAACAAAGTCATATTGGTCGGCACTTGCGGCCAGGATCCCGAAGTTCGCTACCTGCCTAACGGTAA
CGCCGTGACCAACCTGAGTCTGGCAACCAGCGAACAGTGGACCGACAAGCAAACCGGTCAGAAGGTCGAGAAGACCGAAT
GGCACCGTGTTTCGATGTTCGGCAAGGTTGCGGAAATCGCCGGCGAATACCTGCGTAAAGGTTCGCAGGTGTACATCGAA
GGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGTATCAAGCGTTACACCACCGAAATCGTGGTCGACATGCAAGGCAC
CATGCAACTGCTCGGCGGCCGTCCTCAACAGGGCGATCAACAAGGCGGTGGCAACAACTACCAGCAGCAGGCACCACGCC
AGCAGGCTCCACGCCCGCAGCAGTCGGCTCCGCAACAGCGCCCGGCACCCGCTCCACAGCAAGCCGCGCCGCAACCGGCT
CCGGATTTCGACAGCTTCGATGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
57.923 |
100 |
0.616 |
| ssb | Glaesserella parasuis strain SC1401 |
49.451 |
100 |
0.523 |
| ssb | Neisseria meningitidis MC58 |
47.514 |
100 |
0.5 |
| ssb | Neisseria gonorrhoeae MS11 |
47.514 |
100 |
0.5 |