Detailed information NTG0181549

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AsACE_RS16670
• Genome accession: NZ_CP015615
• Coordinates: 2739515..2740375 (+)
• Length: 286 a.a.
• NCBI ID: WP_076754537.1
• Uniprot ID: -
• Organism: Acinetobacter schindleri strain ACE
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2734515..2745375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AsACE_RS13260 (AsACE_CH02640)	secG	2735128..2735457 (-)	330	WP_004896327.1	preprotein translocase subunit SecG	-
AsACE_RS13265 (AsACE_CH02641)	tpiA	2735471..2736262 (-)	792	WP_076754533.1	triose-phosphate isomerase	-
AsACE_RS13270 (AsACE_CH02642)	pilB	2736545..2738254 (+)	1710	WP_076754535.1	type IV-A pilus assembly ATPase PilB	Machinery gene
AsACE_RS13275 (AsACE_CH02643)	pilC	2738286..2739515 (+)	1230	WP_004810078.1	type II secretion system F family protein	Machinery gene
AsACE_RS16670 (AsACE_CH02644)	pilD	2739515..2740375 (+)	861	WP_076754537.1	prepilin peptidase	Machinery gene
AsACE_RS13285 (AsACE_CH02645)	coaE	2740377..2740973 (+)	597	WP_076754540.1	dephospho-CoA kinase	-
AsACE_RS13290 (AsACE_CH02646)	-	2740994..2741917 (-)	924	WP_034424053.1	DMT family transporter	-
AsACE_RS13295 (AsACE_CH02647)	rlmB	2741924..2742673 (-)	750	WP_008306825.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
AsACE_RS13300 (AsACE_CH02648)	-	2742826..2743149 (-)	324	WP_004810087.1	pyrimidine/purine nucleoside phosphorylase	-
AsACE_RS13305 (AsACE_CH02649)	recN	2743568..2745229 (+)	1662	WP_076754541.1	DNA repair protein RecN	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32027.25 Da
• Isoelectric Point: 8.2629

>NTDB_id=181549 AsACE_RS16670 WP_076754537.1 2739515..2740375(+) (pilD) [Acinetobacter schindleri strain ACE]
MQDLILYFTQNPTALYIAVGLFSLCIGSFLNVVIYRTPKMMEQEWRNDCQLFLHPDQPIIDESKLTLSKPASTCPKCHTR
IRWYQNIPVISWLALRGKCANCQNPISARYPFIEILTAVCALTVLAVFGPTVQMLFGLVLTYILIALTFIDFDTQLLPDR
YTLPLAALGLGVNSYAIYTSPTSAIWGYIIGFLCLWVVYYLFKIVTGKEGMGYGDFKLLAALGAWMGPLMLPLVVLLSSL
VGAIIGIILLKVRKENQPFAFGPYIAIAGWIAFLWGEQIMKVYLGQ

Nucleotide

• Length: 861 bp

>NTDB_id=181549 AsACE_RS16670 WP_076754537.1 2739515..2740375(+) (pilD) [Acinetobacter schindleri strain ACE]
ATGCAAGATCTTATTTTATATTTCACTCAAAACCCGACTGCGCTCTATATTGCAGTCGGGCTTTTTAGTCTCTGTATCGG
TAGTTTCCTGAATGTCGTAATTTACCGCACCCCTAAAATGATGGAACAGGAATGGCGTAACGACTGCCAGCTGTTTTTAC
ACCCTGATCAACCGATCATTGATGAAAGCAAGCTCACATTAAGTAAACCTGCGTCGACCTGTCCAAAATGTCATACACGG
ATTCGCTGGTATCAAAATATTCCTGTGATCAGCTGGCTGGCTCTTCGCGGCAAATGCGCTAACTGTCAAAATCCAATTAG
TGCCCGTTATCCATTCATTGAAATTCTAACAGCAGTTTGTGCATTGACCGTTTTGGCTGTATTTGGTCCTACAGTACAAA
TGTTGTTCGGTCTGGTGCTGACTTATATTCTCATTGCACTAACCTTTATTGACTTTGATACCCAGCTGCTTCCAGATCGC
TATACCCTTCCACTTGCAGCTTTAGGCTTAGGGGTGAATAGCTATGCAATTTACACCTCACCAACTTCAGCCATCTGGGG
TTATATCATTGGCTTCCTGTGTTTATGGGTCGTGTACTACCTGTTCAAAATAGTAACTGGTAAAGAAGGCATGGGTTATG
GTGATTTTAAATTGCTGGCTGCACTAGGTGCCTGGATGGGACCGTTAATGTTGCCACTAGTTGTATTATTGTCATCACTC
GTCGGTGCAATCATTGGCATTATCCTGCTAAAAGTGCGTAAGGAAAATCAGCCTTTTGCTTTTGGTCCCTATATTGCCAT
TGCCGGCTGGATCGCTTTCCTGTGGGGCGAGCAGATTATGAAAGTCTATTTAGGTCAATAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-126)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	80.351	99.65	0.801
pilD	Acinetobacter baumannii D1279779	80	99.65	0.797
pilD	Vibrio campbellii strain DS40M4	52.128	98.601	0.514
pilD	Vibrio cholerae strain A1552	54.511	93.007	0.507
pilD	Neisseria gonorrhoeae MS11	46.886	95.455	0.448