Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   AsACE_RS01490 Genome accession   NZ_CP015615
Coordinates   318156..320384 (-) Length   742 a.a.
NCBI ID   WP_099046668.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain ACE     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 313156..325384
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AsACE_RS01470 (AsACE_CH00291) - 313753..314214 (-) 462 WP_004813478.1 DUF2147 domain-containing protein -
  AsACE_RS01475 (AsACE_CH00292) - 314409..314873 (-) 465 WP_081409079.1 DUF2147 domain-containing protein -
  AsACE_RS01480 (AsACE_CH00293) hslO 315335..316210 (-) 876 WP_004813475.1 Hsp33 family molecular chaperone HslO -
  AsACE_RS01485 (AsACE_CH00294) - 316261..318114 (-) 1854 WP_076752963.1 cation:proton antiporter -
  AsACE_RS01490 (AsACE_CH00295) priA 318156..320384 (-) 2229 WP_099046668.1 primosomal protein N' Machinery gene
  AsACE_RS01495 (AsACE_CH00296) gspF 320529..321734 (+) 1206 WP_076752964.1 type II secretion system inner membrane protein GspF -
  AsACE_RS01500 (AsACE_CH00297) gspG 321823..322290 (+) 468 WP_227499334.1 type II secretion system major pseudopilin GspG -
  AsACE_RS01505 (AsACE_CH00298) - 322575..322910 (+) 336 WP_048881185.1 hypothetical protein -
  AsACE_RS01510 (AsACE_CH00299) lnt 323096..324658 (-) 1563 WP_076752965.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84180.03 Da        Isoelectric Point: 8.4584

>NTDB_id=181509 AsACE_RS01490 WP_099046668.1 318156..320384(-) (priA) [Acinetobacter schindleri strain ACE]
MPISDHPTSTPSVYRVRVAVPVHLFDCFDYSLSAAQYQQAEVGARVAVSFGRQNLVGVIMEKLPPDTPLDSSFKLKEITE
LLDDRALIDDKVLNLLNWSAQYYQFPIGEVVQSALPTLLRQGKPYNLLARNWKLLDDQAEAKVRRSERQQEAYKILKLHP
VGTTETVLNLAGIETATLKALEKKGICECVLEPQDFSPQPVQLAQMPLTANPEQQHAIQQVLKFKNKYQAFLLDGLTGSG
KTEVYLQIMEKVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAETGKASIVLGTRSAIYT
PMPNLGLIILDEEHDLSFKQQEGFRYHARDVALYRGHLQQCPVLLGSATPSIDTYALVANGKMQVLELNQRAGTALMPKI
HILDLKVAQKQHDISLHLIQEIRKRLEKKEQVLVFLNRRGYAPVLICDSCGWQAQCPNCDANFTVHRQPYQHLHCHHCGT
LHRMPDHCPSCNHTELKTLGMGTGKVEEQLNELFPDHEVIRVDRDSTSRVGSWQKIYDKIQKSEPAILLGTQMLAKGHHF
PYVTLVAILDIDSGLLSVDFRATERTAQLIVQVAGRAGRGEHKGDVYLQTLRPDHALLNTLVTDNYRAFAKQTLEQRKIA
RMPPYRYAVMIRCESRDQALNTEFLQKHAAFLRQYQDLQLEIWGPIPAPMERKAGRYQSHMVLLSADRPRLHYYVRAWWQ
AMLQDKPSSMKLSLDVDPQELS

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=181509 AsACE_RS01490 WP_099046668.1 318156..320384(-) (priA) [Acinetobacter schindleri strain ACE]
TTGCCCATCTCAGATCACCCAACCTCAACTCCTTCAGTTTATCGTGTTCGTGTTGCTGTTCCAGTTCATCTGTTTGACTG
TTTTGATTACAGTTTAAGTGCGGCACAATATCAGCAGGCTGAAGTTGGTGCGCGCGTGGCAGTGTCTTTCGGCCGGCAGA
ATCTGGTTGGGGTCATTATGGAAAAGCTGCCACCAGACACTCCGCTAGATTCCAGTTTTAAACTTAAAGAGATTACTGAA
TTACTGGATGACCGGGCGCTCATTGATGACAAGGTACTGAATCTGCTGAACTGGTCAGCGCAGTATTACCAGTTCCCGAT
TGGTGAAGTGGTGCAAAGTGCCTTACCAACCTTATTACGTCAGGGTAAGCCCTATAACCTGCTGGCCCGAAACTGGAAAC
TGTTAGATGACCAGGCAGAAGCCAAGGTACGCCGTTCCGAGCGTCAGCAGGAAGCCTATAAAATTTTAAAATTGCATCCA
GTCGGTACTACTGAAACTGTACTGAACCTGGCAGGGATCGAGACAGCCACCCTAAAAGCTTTAGAGAAAAAAGGAATTTG
TGAATGCGTGCTGGAACCCCAGGATTTCAGCCCGCAGCCTGTTCAACTGGCACAAATGCCGCTTACAGCCAATCCGGAAC
AGCAGCATGCCATTCAACAGGTACTGAAATTTAAAAATAAATATCAGGCCTTTTTACTGGATGGTCTGACCGGCAGCGGC
AAGACTGAAGTTTATTTGCAGATCATGGAAAAGGTGCTGAAACAGGGAAAACAGGTTTTAGTGCTGGTACCGGAAATTGG
CCTGACGCCACAAACCATTAGCCGGTTCCAGTCACGTTTCCATTGTCATATTGCCTTGTTACATTCTGGTTTAAATGACT
CGAAACGTCTGCAAGCCTGGCAAGCCGCAGAAACCGGTAAAGCCTCGATTGTGCTGGGTACCCGTTCTGCTATTTATACC
CCGATGCCCAATCTGGGACTGATCATCCTGGATGAGGAACATGATCTGTCCTTTAAACAGCAGGAAGGCTTCCGTTATCA
TGCCCGAGATGTTGCGCTTTATCGCGGGCATTTGCAGCAATGTCCAGTGCTTCTGGGCTCTGCCACACCCAGCATCGATA
CCTATGCACTAGTTGCCAATGGCAAAATGCAGGTACTGGAACTTAACCAACGTGCTGGTACAGCCTTAATGCCAAAGATT
CATATTCTAGATTTAAAGGTGGCACAGAAACAGCATGACATCAGCCTGCATCTGATTCAGGAAATACGCAAACGTCTGGA
AAAAAAGGAACAGGTACTGGTGTTCCTGAACCGCCGTGGTTATGCACCCGTTTTGATTTGTGACAGCTGTGGCTGGCAGG
CACAGTGTCCAAACTGTGATGCCAATTTCACTGTACACCGTCAGCCATATCAACATTTACATTGTCACCATTGTGGCACC
CTGCACCGTATGCCAGATCATTGTCCAAGCTGCAATCATACTGAACTCAAAACACTCGGCATGGGAACCGGCAAGGTCGA
AGAGCAATTGAATGAACTCTTTCCCGATCATGAAGTCATTCGGGTAGATCGTGATTCTACCAGTCGGGTCGGTAGCTGGC
AGAAAATCTATGACAAGATTCAGAAAAGCGAACCGGCGATTTTGCTCGGTACGCAAATGCTGGCCAAAGGTCACCATTTC
CCCTATGTCACACTGGTCGCTATTTTAGATATTGATTCTGGTCTGCTCAGTGTAGACTTCCGTGCCACCGAACGCACTGC
CCAACTGATTGTACAGGTGGCTGGTCGTGCCGGTCGTGGCGAGCACAAGGGTGATGTCTATCTACAGACCTTACGTCCTG
ATCATGCTTTGCTAAATACCTTGGTGACAGATAATTACCGGGCTTTTGCCAAACAGACCTTAGAGCAGCGTAAGATTGCC
CGCATGCCACCCTATCGCTATGCAGTGATGATCCGTTGCGAATCACGTGATCAGGCATTAAATACAGAGTTCTTACAGAA
ACATGCTGCCTTCTTAAGGCAGTATCAGGACCTGCAACTGGAGATCTGGGGACCTATTCCAGCACCAATGGAACGCAAGG
CGGGCCGTTACCAATCACATATGGTACTACTGTCTGCAGACCGTCCACGTTTGCACTATTATGTCAGGGCATGGTGGCAA
GCCATGCTGCAAGACAAACCTTCCTCAATGAAGTTAAGCCTGGATGTCGATCCACAAGAACTGAGCTAG

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(211-371)

Primosomal protein N C-terminal domain (PriA_C)

(644-738)

3DNA-binding domain (3BD) (PriA_3primeBD)

(17-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

70.968

100

0.712

Multiple sequence alignment