Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | A6M16_RS08575 | Genome accession | NZ_CP015557 |
| Coordinates | 1732163..1732657 (-) | Length | 164 a.a. |
| NCBI ID | WP_014638587.1 | Uniprot ID | G7SHQ7 |
| Organism | Streptococcus suis strain DN13 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1727163..1737657
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6M16_RS08560 (A6M16_08565) | - | 1729854..1730798 (+) | 945 | WP_002939248.1 | magnesium transporter CorA family protein | - |
| A6M16_RS08565 (A6M16_08570) | - | 1730814..1731470 (+) | 657 | WP_009910733.1 | DUF1129 domain-containing protein | - |
| A6M16_RS11005 | - | 1731609..1731851 (+) | 243 | WP_153599851.1 | hypothetical protein | - |
| A6M16_RS08570 (A6M16_08575) | rpsR | 1731891..1732130 (-) | 240 | WP_002939250.1 | 30S ribosomal protein S18 | - |
| A6M16_RS08575 (A6M16_08580) | ssbA | 1732163..1732657 (-) | 495 | WP_014638587.1 | single-stranded DNA-binding protein | Machinery gene |
| A6M16_RS08580 (A6M16_08585) | rpsF | 1732669..1732959 (-) | 291 | WP_002942403.1 | 30S ribosomal protein S6 | - |
| A6M16_RS08585 (A6M16_08590) | - | 1733131..1734120 (-) | 990 | WP_015647335.1 | lipoate--protein ligase | - |
| A6M16_RS08590 (A6M16_08595) | - | 1734204..1735643 (-) | 1440 | WP_063725356.1 | 6-phospho-beta-glucosidase | - |
| A6M16_RS08595 (A6M16_08600) | - | 1735658..1736260 (-) | 603 | WP_063725357.1 | histidine phosphatase family protein | - |
| A6M16_RS08600 (A6M16_08605) | - | 1736272..1736868 (-) | 597 | WP_024389233.1 | histidine phosphatase family protein | - |
Sequence
Protein
Download Length: 164 a.a. Molecular weight: 18026.77 Da Isoelectric Point: 4.7294
>NTDB_id=180693 A6M16_RS08575 WP_014638587.1 1732163..1732657(-) (ssbA) [Streptococcus suis strain DN13]
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINVVIWRQQAENLANWAKKGALIGVTGRIQTR
SYDNQQGQRVYVTEVVAESFQLLESRTAREGQGGGYSAGNSFAGGNDSNSPYQAPAQSTPNFAREESPFGASNPMDISDD
DLPF
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINVVIWRQQAENLANWAKKGALIGVTGRIQTR
SYDNQQGQRVYVTEVVAESFQLLESRTAREGQGGGYSAGNSFAGGNDSNSPYQAPAQSTPNFAREESPFGASNPMDISDD
DLPF
Nucleotide
Download Length: 495 bp
>NTDB_id=180693 A6M16_RS08575 WP_014638587.1 1732163..1732657(-) (ssbA) [Streptococcus suis strain DN13]
ATGATTAATAATGTAGTATTGGTTGGTCGTATGACCCGTGATGCAGAACTTCGTTATACTCCGTCTAATCAAGCTGTTGC
GACTTTTACTTTGGCGGTTAACCGCAATTTTAAAAATCAAAACGGTGAGCGTGAAGCGGACTTTATCAACGTAGTCATTT
GGCGTCAACAAGCTGAGAATTTGGCGAATTGGGCTAAGAAAGGTGCTCTGATTGGTGTTACAGGTCGTATCCAGACACGT
AGCTATGACAATCAGCAAGGGCAACGTGTCTACGTTACTGAGGTAGTTGCAGAAAGTTTCCAACTCTTGGAAAGCCGTAC
TGCCCGTGAAGGTCAAGGTGGAGGCTATTCAGCTGGCAACTCGTTTGCTGGAGGAAATGATTCCAACTCACCTTATCAAG
CGCCTGCACAATCTACACCAAACTTCGCTCGAGAAGAAAGTCCATTTGGAGCAAGTAATCCGATGGATATATCAGACGAT
GACCTACCATTCTAG
ATGATTAATAATGTAGTATTGGTTGGTCGTATGACCCGTGATGCAGAACTTCGTTATACTCCGTCTAATCAAGCTGTTGC
GACTTTTACTTTGGCGGTTAACCGCAATTTTAAAAATCAAAACGGTGAGCGTGAAGCGGACTTTATCAACGTAGTCATTT
GGCGTCAACAAGCTGAGAATTTGGCGAATTGGGCTAAGAAAGGTGCTCTGATTGGTGTTACAGGTCGTATCCAGACACGT
AGCTATGACAATCAGCAAGGGCAACGTGTCTACGTTACTGAGGTAGTTGCAGAAAGTTTCCAACTCTTGGAAAGCCGTAC
TGCCCGTGAAGGTCAAGGTGGAGGCTATTCAGCTGGCAACTCGTTTGCTGGAGGAAATGATTCCAACTCACCTTATCAAG
CGCCTGCACAATCTACACCAAACTTCGCTCGAGAAGAAAGTCCATTTGGAGCAAGTAATCCGATGGATATATCAGACGAT
GACCTACCATTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.558 |
100 |
0.604 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.235 |
100 |
0.604 |
| ssb | Glaesserella parasuis strain SC1401 |
32.105 |
100 |
0.372 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.046 |
66.463 |
0.366 |