Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | A6046_RS04155 | Genome accession | NZ_CP015434 |
| Coordinates | 791221..792363 (+) | Length | 380 a.a. |
| NCBI ID | WP_010945645.1 | Uniprot ID | - |
| Organism | [Haemophilus] ducreyi strain GHA9 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 786221..797363
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6046_RS09225 | - | 787841..788137 (+) | 297 | WP_010945650.1 | hypothetical protein | - |
| A6046_RS04135 (A6046_04145) | - | 788269..788559 (+) | 291 | WP_041603730.1 | YfcZ/YiiS family protein | - |
| A6046_RS04140 (A6046_04150) | - | 789015..789347 (+) | 333 | WP_010945648.1 | DMT family transporter | - |
| A6046_RS04145 (A6046_04155) | rfaD | 789443..790384 (-) | 942 | WP_010945647.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| A6046_RS04150 (A6046_04160) | def | 790516..791031 (-) | 516 | WP_010945646.1 | peptide deformylase | - |
| A6046_RS04155 (A6046_04165) | dprA | 791221..792363 (+) | 1143 | WP_010945645.1 | DNA-processing protein DprA | Machinery gene |
| A6046_RS04160 (A6046_04170) | - | 792473..794482 (-) | 2010 | WP_010945644.1 | OPT family oligopeptide transporter | - |
| A6046_RS04165 (A6046_04175) | secE | 794772..795188 (+) | 417 | WP_010945643.1 | preprotein translocase subunit SecE | - |
| A6046_RS04170 (A6046_04180) | nusG | 795190..795753 (+) | 564 | WP_010945642.1 | transcription termination/antitermination protein NusG | - |
| A6046_RS04175 (A6046_04185) | rplK | 795941..796369 (+) | 429 | WP_005599211.1 | 50S ribosomal protein L11 | - |
| A6046_RS04180 (A6046_04190) | rplA | 796374..797063 (+) | 690 | WP_010945641.1 | 50S ribosomal protein L1 | - |
Sequence
Protein
Download Length: 380 a.a. Molecular weight: 42165.79 Da Isoelectric Point: 6.3418
>NTDB_id=179649 A6046_RS04155 WP_010945645.1 791221..792363(+) (dprA) [[Haemophilus] ducreyi strain GHA9]
MKQLALLKLLQIPQLGPQRIARLLNQIDFAEFCQYSKKELQQMGWNDKQIQCWFQPEMRWIDRAITWAEQPNQRLVTLFD
KDYPFLLQQISTAPPLLFVRGSVASLTLPQIAIVGSRDYSPYGEYWASYFTRELIEQGFAVTSGLAIGIDGFCHKQAVKQ
QAVTIAVLGSGLDQVYPARHKKLAEQIIANGGALVSEFFPDQPPLAEHFPRRNRIISGLSLGTLVVEATINSGSLITARY
ALEQGREVFALPNTAQNPYAVGCHQLIKEGAILTESIADILQAIQHQYRPSAKLVNANSMNNPPNIANQQLTIPLTDKIL
PDLTACQQQIMQNISFTPIAIDDLAKATDIAVEILLVELLGLELLGMIKQVCGGYVVTQA
MKQLALLKLLQIPQLGPQRIARLLNQIDFAEFCQYSKKELQQMGWNDKQIQCWFQPEMRWIDRAITWAEQPNQRLVTLFD
KDYPFLLQQISTAPPLLFVRGSVASLTLPQIAIVGSRDYSPYGEYWASYFTRELIEQGFAVTSGLAIGIDGFCHKQAVKQ
QAVTIAVLGSGLDQVYPARHKKLAEQIIANGGALVSEFFPDQPPLAEHFPRRNRIISGLSLGTLVVEATINSGSLITARY
ALEQGREVFALPNTAQNPYAVGCHQLIKEGAILTESIADILQAIQHQYRPSAKLVNANSMNNPPNIANQQLTIPLTDKIL
PDLTACQQQIMQNISFTPIAIDDLAKATDIAVEILLVELLGLELLGMIKQVCGGYVVTQA
Nucleotide
Download Length: 1143 bp
>NTDB_id=179649 A6046_RS04155 WP_010945645.1 791221..792363(+) (dprA) [[Haemophilus] ducreyi strain GHA9]
ATGAAACAATTGGCATTACTTAAATTATTGCAGATTCCACAACTAGGCCCACAGCGGATTGCGCGTTTATTAAATCAAAT
TGATTTTGCTGAATTTTGTCAATATAGCAAAAAAGAACTACAGCAAATGGGATGGAATGACAAACAAATTCAATGTTGGT
TTCAGCCTGAAATGCGTTGGATTGATCGGGCAATAACTTGGGCAGAACAGCCAAATCAACGGCTTGTGACACTGTTTGAT
AAAGATTATCCCTTTTTATTACAGCAAATTAGCACTGCACCACCATTATTATTTGTGCGTGGTTCGGTGGCTAGCTTAAC
TCTGCCACAAATTGCGATTGTTGGCAGTCGTGATTATTCTCCTTATGGAGAGTATTGGGCCTCTTATTTTACACGAGAAT
TAATTGAACAAGGTTTTGCGGTAACAAGTGGCTTGGCGATTGGCATTGATGGTTTTTGTCATAAACAAGCAGTAAAACAG
CAAGCGGTGACTATTGCTGTATTAGGTAGCGGTTTAGATCAAGTTTATCCCGCACGTCATAAAAAATTAGCAGAACAAAT
TATTGCGAATGGTGGAGCATTAGTGTCAGAGTTTTTTCCCGATCAACCCCCGCTAGCGGAACATTTTCCTCGTCGAAATC
GTATTATTAGTGGCTTGTCACTTGGTACTTTAGTGGTAGAAGCAACGATTAATAGTGGCTCATTAATTACCGCACGCTAT
GCTTTAGAGCAAGGGCGAGAGGTCTTTGCTTTGCCGAATACTGCACAAAATCCTTATGCAGTGGGTTGCCATCAATTGAT
TAAAGAAGGCGCTATTTTAACCGAGTCGATAGCGGATATTTTACAAGCGATTCAGCATCAATATCGACCATCAGCTAAGT
TAGTTAATGCAAATAGCATGAATAATCCCCCTAATATTGCTAATCAGCAATTGACAATACCGTTAACGGATAAAATATTG
CCGGATTTGACCGCTTGTCAGCAACAGATTATGCAAAATATCAGTTTTACGCCAATTGCAATAGATGATTTAGCCAAAGC
AACGGATATAGCGGTCGAAATATTATTAGTTGAGCTACTTGGTTTAGAATTATTAGGTATGATTAAACAGGTTTGTGGGG
GATATGTAGTGACACAGGCATAA
ATGAAACAATTGGCATTACTTAAATTATTGCAGATTCCACAACTAGGCCCACAGCGGATTGCGCGTTTATTAAATCAAAT
TGATTTTGCTGAATTTTGTCAATATAGCAAAAAAGAACTACAGCAAATGGGATGGAATGACAAACAAATTCAATGTTGGT
TTCAGCCTGAAATGCGTTGGATTGATCGGGCAATAACTTGGGCAGAACAGCCAAATCAACGGCTTGTGACACTGTTTGAT
AAAGATTATCCCTTTTTATTACAGCAAATTAGCACTGCACCACCATTATTATTTGTGCGTGGTTCGGTGGCTAGCTTAAC
TCTGCCACAAATTGCGATTGTTGGCAGTCGTGATTATTCTCCTTATGGAGAGTATTGGGCCTCTTATTTTACACGAGAAT
TAATTGAACAAGGTTTTGCGGTAACAAGTGGCTTGGCGATTGGCATTGATGGTTTTTGTCATAAACAAGCAGTAAAACAG
CAAGCGGTGACTATTGCTGTATTAGGTAGCGGTTTAGATCAAGTTTATCCCGCACGTCATAAAAAATTAGCAGAACAAAT
TATTGCGAATGGTGGAGCATTAGTGTCAGAGTTTTTTCCCGATCAACCCCCGCTAGCGGAACATTTTCCTCGTCGAAATC
GTATTATTAGTGGCTTGTCACTTGGTACTTTAGTGGTAGAAGCAACGATTAATAGTGGCTCATTAATTACCGCACGCTAT
GCTTTAGAGCAAGGGCGAGAGGTCTTTGCTTTGCCGAATACTGCACAAAATCCTTATGCAGTGGGTTGCCATCAATTGAT
TAAAGAAGGCGCTATTTTAACCGAGTCGATAGCGGATATTTTACAAGCGATTCAGCATCAATATCGACCATCAGCTAAGT
TAGTTAATGCAAATAGCATGAATAATCCCCCTAATATTGCTAATCAGCAATTGACAATACCGTTAACGGATAAAATATTG
CCGGATTTGACCGCTTGTCAGCAACAGATTATGCAAAATATCAGTTTTACGCCAATTGCAATAGATGATTTAGCCAAAGC
AACGGATATAGCGGTCGAAATATTATTAGTTGAGCTACTTGGTTTAGAATTATTAGGTATGATTAAACAGGTTTGTGGGG
GATATGTAGTGACACAGGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Glaesserella parasuis strain SC1401 |
68.365 |
98.158 |
0.671 |
| dprA | Vibrio campbellii strain DS40M4 |
45.479 |
98.947 |
0.45 |
| dprA | Haemophilus influenzae Rd KW20 |
49.563 |
90.263 |
0.447 |
| dprA | Vibrio cholerae strain A1552 |
42.4 |
98.684 |
0.418 |
| dprA | Legionella pneumophila strain ERS1305867 |
38.564 |
98.947 |
0.382 |