Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | A6041_RS06115 | Genome accession | NZ_CP015429 |
| Coordinates | 1279441..1280583 (+) | Length | 380 a.a. |
| NCBI ID | WP_064082414.1 | Uniprot ID | - |
| Organism | [Haemophilus] ducreyi strain GHA1 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1274441..1285583
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6041_RS06090 (A6041_06100) | - | 1275874..1276359 (+) | 486 | WP_064082419.1 | hypothetical protein | - |
| A6041_RS06095 (A6041_06105) | - | 1276491..1276781 (+) | 291 | WP_064082418.1 | YfcZ/YiiS family protein | - |
| A6041_RS06100 (A6041_06110) | - | 1277237..1277569 (+) | 333 | WP_064082417.1 | DMT family transporter | - |
| A6041_RS06105 (A6041_06115) | rfaD | 1277666..1278607 (-) | 942 | WP_064082416.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| A6041_RS06110 (A6041_06120) | def | 1278737..1279252 (-) | 516 | WP_064082415.1 | peptide deformylase | - |
| A6041_RS06115 (A6041_06125) | dprA | 1279441..1280583 (+) | 1143 | WP_064082414.1 | DNA-processing protein DprA | Machinery gene |
| A6041_RS06120 (A6041_06130) | - | 1280693..1282703 (-) | 2011 | Protein_1190 | OPT family oligopeptide transporter | - |
| A6041_RS06125 (A6041_06135) | secE | 1282997..1283413 (+) | 417 | WP_064083380.1 | preprotein translocase subunit SecE | - |
| A6041_RS06130 (A6041_06140) | nusG | 1283415..1283978 (+) | 564 | WP_064082412.1 | transcription termination/antitermination protein NusG | - |
| A6041_RS06135 (A6041_06145) | rplK | 1284166..1284594 (+) | 429 | WP_005599211.1 | 50S ribosomal protein L11 | - |
| A6041_RS06140 (A6041_06150) | rplA | 1284599..1285288 (+) | 690 | WP_010945641.1 | 50S ribosomal protein L1 | - |
Sequence
Protein
Download Length: 380 a.a. Molecular weight: 42088.55 Da Isoelectric Point: 5.6909
>NTDB_id=179537 A6041_RS06115 WP_064082414.1 1279441..1280583(+) (dprA) [[Haemophilus] ducreyi strain GHA1]
MKQLALLKLLQIPQLGPQRIARLLNQIDFAEFCQYSKTELQQMGWNDKQIQCWFQPEMRWIDRAITWAEQPNQRLVTLFD
KDYPFLLQQISTAPLLLFVRGSVASLTLLQIAIVGSRDYSPYGEYWASYFTRELIEQGFAVTSGLAIGIDGFCHQQAVKQ
QAVTIAVLGSGLDQVYPARHKKLAEQIIANGGALVSEFFPDQPPLAEHFPRRNRIISGLSLGTLVVEATINSGSLITARY
ALEQGREVFALPNTAQNPYAAGCHQLIKEGAILTESIADILQAIQHQYRPSAKLVNANSVNNSPNIANQQLTIPLTDKTL
PDLTACQQQIMQNISFTPIAIDDLAKATDIAVEILLVELLGLELLGMIKQVCGGYVVTQA
MKQLALLKLLQIPQLGPQRIARLLNQIDFAEFCQYSKTELQQMGWNDKQIQCWFQPEMRWIDRAITWAEQPNQRLVTLFD
KDYPFLLQQISTAPLLLFVRGSVASLTLLQIAIVGSRDYSPYGEYWASYFTRELIEQGFAVTSGLAIGIDGFCHQQAVKQ
QAVTIAVLGSGLDQVYPARHKKLAEQIIANGGALVSEFFPDQPPLAEHFPRRNRIISGLSLGTLVVEATINSGSLITARY
ALEQGREVFALPNTAQNPYAAGCHQLIKEGAILTESIADILQAIQHQYRPSAKLVNANSVNNSPNIANQQLTIPLTDKTL
PDLTACQQQIMQNISFTPIAIDDLAKATDIAVEILLVELLGLELLGMIKQVCGGYVVTQA
Nucleotide
Download Length: 1143 bp
>NTDB_id=179537 A6041_RS06115 WP_064082414.1 1279441..1280583(+) (dprA) [[Haemophilus] ducreyi strain GHA1]
ATGAAACAATTGGCATTACTTAAATTATTGCAGATTCCACAACTAGGCCCACAGCGGATTGCACGTTTATTAAATCAAAT
TGATTTTGCTGAATTTTGTCAATATAGCAAAACAGAACTACAGCAAATGGGATGGAATGACAAACAAATTCAATGTTGGT
TTCAGCCTGAAATGCGTTGGATTGATCGGGCAATAACTTGGGCAGAACAGCCAAATCAACGGCTTGTGACACTGTTTGAT
AAAGATTATCCCTTTTTATTACAGCAAATTAGCACTGCACCACTATTATTATTTGTGCGTGGTTCGGTGGCTAGCTTAAC
TCTGCTACAAATTGCGATTGTTGGCAGTCGTGATTATTCTCCTTATGGAGAGTATTGGGCCTCTTATTTTACACGCGAAT
TAATTGAGCAAGGTTTTGCGGTAACAAGTGGCTTGGCGATTGGCATTGATGGTTTTTGTCATCAACAAGCAGTAAAACAG
CAAGCGGTGACTATTGCTGTATTAGGTAGCGGTTTAGATCAAGTTTATCCCGCACGTCATAAAAAATTAGCAGAACAAAT
TATTGCGAATGGTGGAGCATTAGTGTCAGAGTTTTTTCCCGATCAACCCCCGCTAGCGGAACATTTTCCTCGTCGAAATC
GTATTATTAGTGGCTTGTCACTTGGTACTTTAGTGGTAGAAGCAACGATTAATAGTGGCTCATTAATTACCGCACGCTAT
GCTTTAGAGCAAGGGCGAGAGGTCTTTGCTTTGCCGAATACTGCACAAAATCCTTATGCAGCAGGTTGCCATCAATTGAT
TAAGGAAGGCGCTATTTTAACCGAATCGATAGCGGATATTTTACAAGCGATTCAGCATCAATATCGACCATCAGCTAAGC
TAGTTAATGCAAATAGCGTGAATAATTCCCCTAATATTGCTAATCAGCAATTGACAATACCGTTAACGGATAAAACATTG
CCGGATTTGACCGCTTGTCAGCAACAGATTATGCAAAATATCAGTTTTACGCCGATTGCAATAGATGATTTAGCTAAAGC
AACGGATATAGCGGTCGAAATATTATTAGTTGAGCTACTTGGTTTAGAATTATTAGGTATGATTAAACAGGTTTGTGGGG
GATATGTAGTGACACAGGCATAA
ATGAAACAATTGGCATTACTTAAATTATTGCAGATTCCACAACTAGGCCCACAGCGGATTGCACGTTTATTAAATCAAAT
TGATTTTGCTGAATTTTGTCAATATAGCAAAACAGAACTACAGCAAATGGGATGGAATGACAAACAAATTCAATGTTGGT
TTCAGCCTGAAATGCGTTGGATTGATCGGGCAATAACTTGGGCAGAACAGCCAAATCAACGGCTTGTGACACTGTTTGAT
AAAGATTATCCCTTTTTATTACAGCAAATTAGCACTGCACCACTATTATTATTTGTGCGTGGTTCGGTGGCTAGCTTAAC
TCTGCTACAAATTGCGATTGTTGGCAGTCGTGATTATTCTCCTTATGGAGAGTATTGGGCCTCTTATTTTACACGCGAAT
TAATTGAGCAAGGTTTTGCGGTAACAAGTGGCTTGGCGATTGGCATTGATGGTTTTTGTCATCAACAAGCAGTAAAACAG
CAAGCGGTGACTATTGCTGTATTAGGTAGCGGTTTAGATCAAGTTTATCCCGCACGTCATAAAAAATTAGCAGAACAAAT
TATTGCGAATGGTGGAGCATTAGTGTCAGAGTTTTTTCCCGATCAACCCCCGCTAGCGGAACATTTTCCTCGTCGAAATC
GTATTATTAGTGGCTTGTCACTTGGTACTTTAGTGGTAGAAGCAACGATTAATAGTGGCTCATTAATTACCGCACGCTAT
GCTTTAGAGCAAGGGCGAGAGGTCTTTGCTTTGCCGAATACTGCACAAAATCCTTATGCAGCAGGTTGCCATCAATTGAT
TAAGGAAGGCGCTATTTTAACCGAATCGATAGCGGATATTTTACAAGCGATTCAGCATCAATATCGACCATCAGCTAAGC
TAGTTAATGCAAATAGCGTGAATAATTCCCCTAATATTGCTAATCAGCAATTGACAATACCGTTAACGGATAAAACATTG
CCGGATTTGACCGCTTGTCAGCAACAGATTATGCAAAATATCAGTTTTACGCCGATTGCAATAGATGATTTAGCTAAAGC
AACGGATATAGCGGTCGAAATATTATTAGTTGAGCTACTTGGTTTAGAATTATTAGGTATGATTAAACAGGTTTGTGGGG
GATATGTAGTGACACAGGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Glaesserella parasuis strain SC1401 |
68.633 |
98.158 |
0.674 |
| dprA | Haemophilus influenzae Rd KW20 |
49.708 |
90 |
0.447 |
| dprA | Vibrio campbellii strain DS40M4 |
45.308 |
98.158 |
0.445 |
| dprA | Vibrio cholerae strain A1552 |
41.867 |
98.684 |
0.413 |
| dprA | Legionella pneumophila strain ERS1305867 |
38.298 |
98.947 |
0.379 |