Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NX99_RS02360 Genome accession   NZ_CP015282
Coordinates   608178..608987 (-) Length   269 a.a.
NCBI ID   WP_126405093.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 27945     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 603178..613987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX99_RS02335 (NX99_02310) - 604170..604556 (-) 387 WP_048790817.1 DUF1934 domain-containing protein -
  NX99_RS02340 (NX99_02315) - 604639..605505 (-) 867 WP_084914609.1 GNAT family N-acetyltransferase -
  NX99_RS02345 (NX99_02320) yidA 605683..606492 (+) 810 WP_002890845.1 sugar-phosphatase -
  NX99_RS02350 (NX99_02325) - 606494..607708 (+) 1215 WP_084914610.1 aminoacyltransferase -
  NX99_RS02355 (NX99_02330) - 607760..608119 (-) 360 WP_037611660.1 YbaN family protein -
  NX99_RS02360 (NX99_02335) vicX 608178..608987 (-) 810 WP_126405093.1 MBL fold metallo-hydrolase Regulator
  NX99_RS02365 (NX99_02340) vicK 608993..610336 (-) 1344 WP_038675887.1 cell wall metabolism sensor histidine kinase VicK Regulator
  NX99_RS02370 (NX99_02345) vicR 610329..611036 (-) 708 WP_002884978.1 response regulator YycF Regulator
  NX99_RS02375 (NX99_02350) - 611336..612103 (+) 768 WP_038675884.1 amino acid ABC transporter ATP-binding protein -
  NX99_RS02380 (NX99_02355) - 612113..612946 (+) 834 WP_037611665.1 transporter substrate-binding domain-containing protein -
  NX99_RS02385 (NX99_02360) - 612964..613662 (+) 699 WP_002886251.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30007.86 Da        Isoelectric Point: 5.3499

>NTDB_id=178199 NX99_RS02360 WP_126405093.1 608178..608987(-) (vicX) [Streptococcus salivarius strain ATCC 27945]
MSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGMD
IYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDLDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAG
IIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTMEN
QLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=178199 NX99_RS02360 WP_126405093.1 608178..608987(-) (vicX) [Streptococcus salivarius strain ATCC 27945]
ATCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTACTTGGAAACTCCAGAGAA
GAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGACCCGAGTGATT
TGGATGCAATCTTAGTAACGCATGAACACAAGGATCACATCCATGGCGTAGGCGTTTTAGCTCGTAAATATGGCATGGAT
ATCTACGCCAACGAGAAAACCTGGCAGATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACATGT
TTTTTCTCGTGACAAGCTTCTGACCTTTGGAGACCTTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATCCAC
AGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTTGTCATGTTAACGGATACGGGTTATGTTTCTGATCGTATGGCAGGT
ATTATTGAGAATGCCGACGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTGGTC
AACCAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATCGGTA
ATAAAACTAAAAAGATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAAAAT
CAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTATGATACCTCACCAGACACAGCGACTCCACTGAC
AGACATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.952

100

0.77

Multiple sequence alignment