Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | A4U85_RS09675 | Genome accession | NZ_CP015121 |
| Coordinates | 2063016..2063396 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain ab736 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2058016..2068396
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4U85_RS09645 (A4U85_09600) | tadA | 2058135..2058638 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| A4U85_RS09650 (A4U85_09605) | - | 2058645..2059769 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| A4U85_RS09655 (A4U85_09610) | ung | 2059766..2060479 (-) | 714 | WP_001177525.1 | uracil-DNA glycosylase | - |
| A4U85_RS09660 (A4U85_09615) | - | 2060530..2061126 (-) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| A4U85_RS09665 (A4U85_09620) | gspK | 2061356..2062315 (-) | 960 | WP_000301461.1 | type II secretion system minor pseudopilin GspK | - |
| A4U85_RS09670 (A4U85_09625) | xcpW | 2062315..2063016 (-) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| A4U85_RS09675 (A4U85_09630) | xcpV | 2063016..2063396 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| A4U85_RS09680 (A4U85_09635) | - | 2063386..2063940 (-) | 555 | WP_000841370.1 | type II secretion system protein | - |
| A4U85_RS09685 (A4U85_09640) | - | 2063950..2064558 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| A4U85_RS09690 (A4U85_09645) | - | 2064596..2065369 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| A4U85_RS09695 (A4U85_09650) | - | 2065387..2065728 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| A4U85_RS09700 (A4U85_09655) | - | 2065740..2066720 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| A4U85_RS09705 (A4U85_09660) | kdsB | 2066732..2067493 (-) | 762 | WP_000680698.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=176903 A4U85_RS09675 WP_000836911.1 2063016..2063396(-) (xcpV) [Acinetobacter baumannii strain ab736]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=176903 A4U85_RS09675 WP_000836911.1 2063016..2063396(-) (xcpV) [Acinetobacter baumannii strain ab736]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |