Detailed information NTG0176892

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: A4U85_RS01610
• Genome accession: NZ_CP015121
• Coordinates: 349405..349887 (+)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ab736
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 344405..354887

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4U85_RS01600 (A4U85_01585)	pilX	344708..345526 (+)	819	WP_000149377.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
A4U85_RS01605 (A4U85_01590)	pilY1	345538..349392 (+)	3855	WP_000768965.1	PilC/PilY family type IV pilus protein	Machinery gene
A4U85_RS01610 (A4U85_01595)	pilY2	349405..349887 (+)	483	WP_001046417.1	type IV pilin protein	Machinery gene
A4U85_RS01615 (A4U85_01600)	pilE	349884..350309 (+)	426	WP_000788344.1	type IV pilin protein	Machinery gene
A4U85_RS01620 (A4U85_01605)	rpsP	350456..350707 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
A4U85_RS01625 (A4U85_01610)	rimM	350727..351275 (+)	549	WP_000189236.1	ribosome maturation factor RimM	-
A4U85_RS01630 (A4U85_01615)	trmD	351321..352061 (+)	741	WP_000464598.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
A4U85_RS01635 (A4U85_01620)	rplS	352270..352638 (+)	369	WP_000014562.1	50S ribosomal protein L19	-
A4U85_RS01640 (A4U85_01625)	-	352691..353632 (-)	942	WP_085916958.1	lipase family alpha/beta hydrolase	-
A4U85_RS01645 (A4U85_01630)	-	353747..354778 (-)	1032	WP_001189454.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=176892 A4U85_RS01610 WP_001046417.1 349405..349887(+) (pilY2) [Acinetobacter baumannii strain ab736]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=176892 A4U85_RS01610 WP_001046417.1 349405..349887(+) (pilY2) [Acinetobacter baumannii strain ab736]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444