Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | A4U85_RS01615 | Genome accession | NZ_CP015121 |
| Coordinates | 349884..350309 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788344.1 | Uniprot ID | A0A6F8TAJ0 |
| Organism | Acinetobacter baumannii strain ab736 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 344884..355309
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4U85_RS01605 (A4U85_01590) | pilY1 | 345538..349392 (+) | 3855 | WP_000768965.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| A4U85_RS01610 (A4U85_01595) | pilY2 | 349405..349887 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| A4U85_RS01615 (A4U85_01600) | pilE | 349884..350309 (+) | 426 | WP_000788344.1 | type IV pilin protein | Machinery gene |
| A4U85_RS01620 (A4U85_01605) | rpsP | 350456..350707 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| A4U85_RS01625 (A4U85_01610) | rimM | 350727..351275 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| A4U85_RS01630 (A4U85_01615) | trmD | 351321..352061 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| A4U85_RS01635 (A4U85_01620) | rplS | 352270..352638 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| A4U85_RS01640 (A4U85_01625) | - | 352691..353632 (-) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| A4U85_RS01645 (A4U85_01630) | - | 353747..354778 (-) | 1032 | WP_001189454.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15234.39 Da Isoelectric Point: 7.1297
>NTDB_id=176893 A4U85_RS01615 WP_000788344.1 349884..350309(+) (pilE) [Acinetobacter baumannii strain ab736]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYSSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYSSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=176893 A4U85_RS01615 WP_000788344.1 349884..350309(+) (pilE) [Acinetobacter baumannii strain ab736]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATTCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATTCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
97.163 |
100 |
0.972 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |