Detailed information NTG0176882

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: A4U85_RS01465
• Genome accession: NZ_CP015121
• Coordinates: 314956..316014 (+)
• Length: 352 a.a.
• NCBI ID: WP_005143496.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ab736
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 309956..321014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4U85_RS01450 (A4U85_01435)	-	311063..311395 (+)	333	WP_000169602.1	hypothetical protein	-
A4U85_RS01455 (A4U85_01440)	-	311398..312222 (+)	825	WP_001990541.1	putative RNA methyltransferase	-
A4U85_RS01460 (A4U85_01445)	ponA	312240..314795 (-)	2556	WP_000736672.1	penicillin-binding protein PBP1a	-
A4U85_RS01465 (A4U85_01450)	pilM	314956..316014 (+)	1059	WP_005143496.1	pilus assembly protein PilM	Machinery gene
A4U85_RS01470 (A4U85_01455)	-	316014..316655 (+)	642	Protein_277	PilN domain-containing protein	-
A4U85_RS01475 (A4U85_01460)	pilO	316652..317392 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
A4U85_RS01480 (A4U85_01465)	pilP	317403..317930 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
A4U85_RS01485 (A4U85_01470)	pilQ	317993..320158 (+)	2166	WP_001017037.1	type IV pilus secretin PilQ family protein	Machinery gene
A4U85_RS01490 (A4U85_01475)	aroK	320170..320739 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39044.64 Da
• Isoelectric Point: 4.4618

>NTDB_id=176882 A4U85_RS01465 WP_005143496.1 314956..316014(+) (pilM) [Acinetobacter baumannii strain ab736]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHIMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=176882 A4U85_RS01465 WP_005143496.1 314956..316014(+) (pilM) [Acinetobacter baumannii strain ab736]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATATCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCAGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
GCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423