Detailed information NTG0176002

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: PA11803_RS30305
• Genome accession: NZ_CP015003
• Coordinates: 6400046..6401110 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain PA11803
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6395046..6406110

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PA11803_RS30280 (PA11803_01700)	aroK	6395581..6396099 (-)	519	WP_003095833.1	shikimate kinase AroK	-
PA11803_RS30285 (PA11803_01701)	pilQ	6396111..6398255 (-)	2145	WP_019726987.1	type 4a pilus secretin PilQ	Machinery gene
PA11803_RS30290 (PA11803_01702)	pilP	6398309..6398833 (-)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
PA11803_RS30295 (PA11803_01703)	pilO	6398830..6399453 (-)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	-
PA11803_RS30300 (PA11803_01704)	pilN	6399450..6400046 (-)	597	WP_003095839.1	type 4a pilus biogenesis protein PilN	-
PA11803_RS30305 (PA11803_01705)	pilM	6400046..6401110 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
PA11803_RS30310 (PA11803_01706)	-	6401295..6403766 (+)	2472	WP_019726988.1	penicillin-binding protein 1A	-
PA11803_RS30315 (PA11803_01707)	-	6403871..6405139 (-)	1269	WP_019726989.1	malic enzyme	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=176002 PA11803_RS30305 WP_003110888.1 6400046..6401110(-) (pilM) [Pseudomonas aeruginosa strain PA11803]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=176002 PA11803_RS30305 WP_003110888.1 6400046..6401110(-) (pilM) [Pseudomonas aeruginosa strain PA11803]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGACTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466