Detailed information NTG0175979

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: BTV17_RS00760
• Genome accession: NZ_CP018806
• Coordinates: 139902..140546 (-)
• Length: 214 a.a.
• NCBI ID: WP_011608291.1
• Uniprot ID: -
• Organism: Histophilus somni strain USDA-ARS-USMARC-63370
• Function: promote expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 134902..145546

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BTV17_RS00730 (BTV17_00730)	yidD	135220..135480 (-)	261	WP_011608286.1	membrane protein insertion efficiency factor YidD	-
BTV17_RS00735 (BTV17_00735)	rnpA	135444..135803 (-)	360	WP_011608287.1	ribonuclease P protein component	-
BTV17_RS00740 (BTV17_00740)	rpmH	135818..135952 (-)	135	WP_007241546.1	50S ribosomal protein L34	-
BTV17_RS00745 (BTV17_00745)	dnaA	136295..137653 (+)	1359	WP_011608288.1	chromosomal replication initiator protein DnaA	-
BTV17_RS00750 (BTV17_00750)	dnaN	137665..138765 (+)	1101	WP_075293536.1	DNA polymerase III subunit beta	-
BTV17_RS00755 (BTV17_00755)	recF	138769..139845 (+)	1077	WP_075293535.1	DNA replication/repair protein RecF	-
BTV17_RS00760 (BTV17_00760)	crp	139902..140546 (-)	645	WP_011608291.1	cAMP-activated global transcriptional regulator CRP	Regulator
BTV17_RS00765 (BTV17_00765)	-	140559..140783 (-)	225	WP_012341336.1	YheU family protein	-
BTV17_RS00770 (BTV17_00770)	slmA	140818..141477 (-)	660	WP_011608293.1	nucleoid occlusion factor SlmA	-
BTV17_RS00775 (BTV17_00775)	dut	141477..141932 (-)	456	WP_011608294.1	dUTP diphosphatase	-
BTV17_RS00780 (BTV17_00780)	coaBC	141929..143155 (-)	1227	WP_075293534.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
BTV17_RS00785 (BTV17_00785)	radC	143328..143996 (+)	669	WP_011608296.1	RadC family protein	Machinery gene
BTV17_RS00790 (BTV17_00790)	rpmB	144217..144453 (+)	237	WP_011608297.1	50S ribosomal protein L28	-
BTV17_RS00795 (BTV17_00795)	rpmG	144465..144635 (+)	171	WP_005542835.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 24029.75 Da
• Isoelectric Point: 7.4775

>NTDB_id=175979 BTV17_RS00760 WP_011608291.1 139902..140546(-) (crp) [Histophilus somni strain USDA-ARS-USMARC-63370]
MLEQQGQSAPSMDPTLEWFLSHCHIHKYSAKSSLIHAGEKAETLYYLIRGSVAVMVKDEEGKEMILTYLSQGDFFGEAGL
FDETQPRSAWVKAKSSCEIAEISYKKFRQLIQVNPEILMYLAGQLAHRLQNTSKQVSNLAFLDVTGRIAQTLLNLAKMPD
AMTHPDGMQIKITRQEIGQMVGCSRETVGRILKMLEDQHLISAHGKTIVVYGTR

Nucleotide

• Length: 645 bp

>NTDB_id=175979 BTV17_RS00760 WP_011608291.1 139902..140546(-) (crp) [Histophilus somni strain USDA-ARS-USMARC-63370]
ATGTTAGAACAACAAGGACAATCAGCACCATCGATGGATCCGACGTTAGAGTGGTTCCTATCTCATTGTCACATTCATAA
ATACTCAGCAAAAAGCTCCCTCATTCATGCTGGAGAAAAGGCGGAAACCCTTTATTATTTAATTAGAGGGTCTGTTGCCG
TGATGGTAAAAGATGAGGAAGGTAAAGAAATGATTTTGACTTATTTAAGTCAAGGTGATTTTTTTGGCGAAGCTGGTTTA
TTTGATGAAACACAGCCTCGTTCGGCTTGGGTTAAAGCTAAAAGCTCATGTGAAATTGCAGAAATTTCTTATAAAAAATT
TCGCCAATTAATTCAAGTTAATCCAGAAATTTTAATGTATTTAGCCGGTCAATTAGCTCATCGTTTACAAAATACTTCAA
AGCAGGTAAGCAATTTGGCATTTTTAGATGTGACAGGTCGTATCGCTCAAACCTTGTTAAATTTAGCTAAGATGCCTGAT
GCAATGACTCATCCGGACGGTATGCAAATTAAAATTACTCGTCAGGAAATAGGACAAATGGTAGGTTGCTCACGAGAAAC
TGTTGGGCGTATTTTGAAAATGTTAGAAGATCAGCATTTAATTTCAGCACATGGCAAAACTATTGTTGTGTATGGTACAA
GATAA

Domains

Predicted by InterProScan.

• Crp-like helix-turn-helix domain (HTH_Crp_2) (146-210)

• Cyclic nucleotide-binding domain (cNMP_binding) (27-113)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Vibrio cholerae strain A1552	81.463	95.794	0.78
crp	Haemophilus influenzae Rd KW20	78.846	97.196	0.766
crp	Acinetobacter baumannii D1279779	44.221	92.991	0.411