Detailed information NTG0175808

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: BTV19_RS00760
• Genome accession: NZ_CP018803
• Coordinates: 139750..140394 (-)
• Length: 214 a.a.
• NCBI ID: WP_011608291.1
• Uniprot ID: -
• Organism: Histophilus somni strain USDA-ARS-USMARC-63255
• Function: promote expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 134750..145394

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BTV19_RS00730 (BTV19_00730)	yidD	135068..135328 (-)	261	WP_011608286.1	membrane protein insertion efficiency factor YidD	-
BTV19_RS00735 (BTV19_00735)	rnpA	135292..135651 (-)	360	WP_011608287.1	ribonuclease P protein component	-
BTV19_RS00740 (BTV19_00740)	rpmH	135666..135800 (-)	135	WP_007241546.1	50S ribosomal protein L34	-
BTV19_RS00745 (BTV19_00745)	dnaA	136143..137501 (+)	1359	WP_011608288.1	chromosomal replication initiator protein DnaA	-
BTV19_RS00750 (BTV19_00750)	dnaN	137513..138613 (+)	1101	WP_075293536.1	DNA polymerase III subunit beta	-
BTV19_RS00755 (BTV19_00755)	recF	138617..139693 (+)	1077	WP_075293535.1	DNA replication/repair protein RecF	-
BTV19_RS00760 (BTV19_00760)	crp	139750..140394 (-)	645	WP_011608291.1	cAMP-activated global transcriptional regulator CRP	Regulator
BTV19_RS00765 (BTV19_00765)	-	140407..140631 (-)	225	WP_012341336.1	YheU family protein	-
BTV19_RS00770 (BTV19_00770)	slmA	140666..141325 (-)	660	WP_011608293.1	nucleoid occlusion factor SlmA	-
BTV19_RS00775 (BTV19_00775)	dut	141325..141780 (-)	456	WP_011608294.1	dUTP diphosphatase	-
BTV19_RS00780 (BTV19_00780)	coaBC	141777..143003 (-)	1227	WP_075293534.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
BTV19_RS00785 (BTV19_00785)	radC	143176..143844 (+)	669	WP_011608296.1	RadC family protein	Machinery gene
BTV19_RS00790 (BTV19_00790)	rpmB	144065..144301 (+)	237	WP_011608297.1	50S ribosomal protein L28	-
BTV19_RS00795 (BTV19_00795)	rpmG	144313..144483 (+)	171	WP_005542835.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 24029.75 Da
• Isoelectric Point: 7.4775

>NTDB_id=175808 BTV19_RS00760 WP_011608291.1 139750..140394(-) (crp) [Histophilus somni strain USDA-ARS-USMARC-63255]
MLEQQGQSAPSMDPTLEWFLSHCHIHKYSAKSSLIHAGEKAETLYYLIRGSVAVMVKDEEGKEMILTYLSQGDFFGEAGL
FDETQPRSAWVKAKSSCEIAEISYKKFRQLIQVNPEILMYLAGQLAHRLQNTSKQVSNLAFLDVTGRIAQTLLNLAKMPD
AMTHPDGMQIKITRQEIGQMVGCSRETVGRILKMLEDQHLISAHGKTIVVYGTR

Nucleotide

• Length: 645 bp

>NTDB_id=175808 BTV19_RS00760 WP_011608291.1 139750..140394(-) (crp) [Histophilus somni strain USDA-ARS-USMARC-63255]
ATGTTAGAACAACAAGGACAATCAGCACCATCGATGGATCCGACGTTAGAGTGGTTCCTATCTCATTGTCACATTCATAA
ATACTCAGCAAAAAGCTCCCTCATTCATGCTGGAGAAAAGGCGGAAACCCTTTATTATTTAATTAGAGGGTCTGTTGCCG
TGATGGTAAAAGATGAGGAAGGTAAAGAAATGATTTTGACTTATTTAAGTCAAGGTGATTTTTTTGGCGAAGCTGGTTTA
TTTGATGAAACACAGCCTCGTTCGGCTTGGGTTAAAGCTAAAAGCTCATGTGAAATTGCAGAAATTTCTTATAAAAAATT
TCGCCAATTAATTCAAGTTAATCCAGAAATTTTAATGTATTTAGCCGGTCAATTAGCTCATCGTTTACAAAATACTTCAA
AGCAGGTAAGCAATTTGGCATTTTTAGATGTGACAGGTCGTATCGCTCAAACCTTGTTAAATTTAGCTAAGATGCCTGAT
GCAATGACTCATCCGGACGGTATGCAAATTAAAATTACTCGTCAGGAAATAGGACAAATGGTAGGTTGCTCACGAGAAAC
TGTTGGGCGTATTTTGAAAATGTTAGAAGATCAGCATTTAATTTCAGCACATGGCAAAACTATTGTTGTGTATGGTACAA
GATAA

Domains

Predicted by InterProScan.

• Crp-like helix-turn-helix domain (HTH_Crp_2) (146-210)

• Cyclic nucleotide-binding domain (cNMP_binding) (27-113)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Vibrio cholerae strain A1552	81.463	95.794	0.78
crp	Haemophilus influenzae Rd KW20	78.846	97.196	0.766
crp	Acinetobacter baumannii D1279779	44.221	92.991	0.411