Detailed information NTG0175752

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: BTV18_RS00765
• Genome accession: NZ_CP018802
• Coordinates: 141043..141687 (-)
• Length: 214 a.a.
• NCBI ID: WP_011608291.1
• Uniprot ID: -
• Organism: Histophilus somni strain USDA-ARS-USMARC-63250
• Function: promote expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 136043..146687

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BTV18_RS00735 (BTV18_00735)	yidD	136361..136621 (-)	261	WP_011608286.1	membrane protein insertion efficiency factor YidD	-
BTV18_RS00740 (BTV18_00740)	rnpA	136585..136944 (-)	360	WP_011608287.1	ribonuclease P protein component	-
BTV18_RS00745 (BTV18_00745)	rpmH	136959..137093 (-)	135	WP_007241546.1	50S ribosomal protein L34	-
BTV18_RS00750 (BTV18_00750)	dnaA	137436..138794 (+)	1359	WP_011608288.1	chromosomal replication initiator protein DnaA	-
BTV18_RS00755 (BTV18_00755)	dnaN	138806..139906 (+)	1101	WP_075293536.1	DNA polymerase III subunit beta	-
BTV18_RS00760 (BTV18_00760)	recF	139910..140986 (+)	1077	WP_075293535.1	DNA replication/repair protein RecF	-
BTV18_RS00765 (BTV18_00765)	crp	141043..141687 (-)	645	WP_011608291.1	cAMP-activated global transcriptional regulator CRP	Regulator
BTV18_RS00770 (BTV18_00770)	-	141700..141924 (-)	225	WP_012341336.1	YheU family protein	-
BTV18_RS00775 (BTV18_00775)	slmA	141959..142618 (-)	660	WP_011608293.1	nucleoid occlusion factor SlmA	-
BTV18_RS00780 (BTV18_00780)	dut	142618..143073 (-)	456	WP_011608294.1	dUTP diphosphatase	-
BTV18_RS00785 (BTV18_00785)	coaBC	143070..144296 (-)	1227	WP_075293534.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
BTV18_RS00790 (BTV18_00790)	radC	144469..145137 (+)	669	WP_011608296.1	RadC family protein	Machinery gene
BTV18_RS00795 (BTV18_00795)	rpmB	145358..145594 (+)	237	WP_011608297.1	50S ribosomal protein L28	-
BTV18_RS00800 (BTV18_00800)	rpmG	145606..145776 (+)	171	WP_005542835.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 24029.75 Da
• Isoelectric Point: 7.4775

>NTDB_id=175752 BTV18_RS00765 WP_011608291.1 141043..141687(-) (crp) [Histophilus somni strain USDA-ARS-USMARC-63250]
MLEQQGQSAPSMDPTLEWFLSHCHIHKYSAKSSLIHAGEKAETLYYLIRGSVAVMVKDEEGKEMILTYLSQGDFFGEAGL
FDETQPRSAWVKAKSSCEIAEISYKKFRQLIQVNPEILMYLAGQLAHRLQNTSKQVSNLAFLDVTGRIAQTLLNLAKMPD
AMTHPDGMQIKITRQEIGQMVGCSRETVGRILKMLEDQHLISAHGKTIVVYGTR

Nucleotide

• Length: 645 bp

>NTDB_id=175752 BTV18_RS00765 WP_011608291.1 141043..141687(-) (crp) [Histophilus somni strain USDA-ARS-USMARC-63250]
ATGTTAGAACAACAAGGACAATCAGCACCATCGATGGATCCGACGTTAGAGTGGTTCCTATCTCATTGTCACATTCATAA
ATACTCAGCAAAAAGCTCCCTCATTCATGCTGGAGAAAAGGCGGAAACCCTTTATTATTTAATTAGAGGGTCTGTTGCCG
TGATGGTAAAAGATGAGGAAGGTAAAGAAATGATTTTGACTTATTTAAGTCAAGGTGATTTTTTTGGCGAAGCTGGTTTA
TTTGATGAAACACAGCCTCGTTCGGCTTGGGTTAAAGCTAAAAGCTCATGTGAAATTGCAGAAATTTCTTATAAAAAATT
TCGCCAATTAATTCAAGTTAATCCAGAAATTTTAATGTATTTAGCCGGTCAATTAGCTCATCGTTTACAAAATACTTCAA
AGCAGGTAAGCAATTTGGCATTTTTAGATGTGACAGGTCGTATCGCTCAAACCTTGTTAAATTTAGCTAAGATGCCTGAT
GCAATGACTCATCCGGACGGTATGCAAATTAAAATTACTCGTCAGGAAATAGGACAAATGGTAGGTTGCTCACGAGAAAC
TGTTGGGCGTATTTTGAAAATGTTAGAAGATCAGCATTTAATTTCAGCACATGGCAAAACTATTGTTGTGTATGGTACAA
GATAA

Domains

Predicted by InterProScan.

• Crp-like helix-turn-helix domain (HTH_Crp_2) (146-210)

• Cyclic nucleotide-binding domain (cNMP_binding) (27-113)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Vibrio cholerae strain A1552	81.463	95.794	0.78
crp	Haemophilus influenzae Rd KW20	78.846	97.196	0.766
crp	Acinetobacter baumannii D1279779	44.221	92.991	0.411