Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   BTN44_RS02700 Genome accession   NZ_CP018629
Coordinates   487396..488019 (+) Length   207 a.a.
NCBI ID   WP_001045132.1    Uniprot ID   -
Organism   Staphylococcus aureus strain MRSA107     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 482396..493019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTN44_RS02680 (BTN44_02670) - 482839..483234 (+) 396 WP_000901021.1 hypothetical protein -
  BTN44_RS02685 (BTN44_02675) fumC 483430..484815 (+) 1386 WP_000116224.1 class II fumarate hydratase -
  BTN44_RS02690 (BTN44_02680) - 485278..486099 (-) 822 WP_000669375.1 RluA family pseudouridine synthase -
  BTN44_RS02695 (BTN44_02685) - 486262..487374 (+) 1113 WP_000437967.1 GAF domain-containing sensor histidine kinase -
  BTN44_RS02700 (BTN44_02690) vraR 487396..488019 (+) 624 WP_001045132.1 response regulator Regulator
  BTN44_RS02705 (BTN44_02695) - 488375..488839 (+) 465 WP_000375864.1 helix-turn-helix transcriptional regulator -
  BTN44_RS02710 (BTN44_02700) - 489018..490142 (+) 1125 WP_000992527.1 DUF445 domain-containing protein -
  BTN44_RS02715 (BTN44_02705) - 490211..490555 (+) 345 WP_000290301.1 YlbF/YmcA family competence regulator -
  BTN44_RS02725 (BTN44_02715) - 490938..491036 (+) 99 WP_001791795.1 hypothetical protein -
  BTN44_RS02730 (BTN44_02720) - 491327..492523 (+) 1197 WP_000238227.1 metallophosphoesterase family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23911.60 Da        Isoelectric Point: 5.5730

>NTDB_id=175255 BTN44_RS02700 WP_001045132.1 487396..488019(+) (vraR) [Staphylococcus aureus strain MRSA107]
MNKVILVDDHYIVRQGLRFLLSTIENIEVLQDFADGETFLEYLKEHEHPDIVLLDLVMPGMNGIEITEYIKAHYPDIKVL
VLTSYVDDEHVISAINKGADGYEMKDVEPQQLIETIRRVMNGEKMIHLKAQDVFETVSQKPHYTNKLSKREIEVLREMVK
GKTNKEIAETLFVSEKTIKTHVSHIFSKLQVSDRTQAAIYAMENKLI

Nucleotide


Download         Length: 624 bp        

>NTDB_id=175255 BTN44_RS02700 WP_001045132.1 487396..488019(+) (vraR) [Staphylococcus aureus strain MRSA107]
ATGAACAAAGTAATATTAGTAGATGACCATTATATTGTGCGACAAGGATTGCGATTTTTATTATCCACGATTGAAAACAT
AGAAGTTTTACAAGACTTTGCAGATGGAGAAACATTTTTAGAATATTTAAAAGAGCATGAGCACCCTGATATTGTGCTAT
TAGATTTAGTGATGCCTGGCATGAATGGTATTGAAATTACGGAATATATTAAGGCACATTATCCGGATATTAAAGTTTTG
GTATTAACAAGTTATGTTGATGATGAACATGTAATTTCAGCAATCAATAAAGGTGCTGATGGTTATGAAATGAAAGACGT
TGAGCCTCAGCAATTAATTGAAACTATTAGACGAGTTATGAACGGTGAAAAAATGATACATCTTAAGGCACAAGATGTAT
TCGAAACAGTTAGCCAAAAACCACACTACACGAATAAGTTGTCAAAGAGAGAAATTGAAGTGTTACGTGAAATGGTTAAA
GGTAAAACAAATAAAGAGATTGCAGAAACTTTATTTGTATCTGAAAAAACAATTAAAACACATGTCAGTCATATATTTAG
TAAATTACAAGTTAGCGATCGTACACAAGCAGCAATTTATGCAATGGAAAATAAGTTGATTTAG

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(146-201)

Response regulator receiver domain (Response_reg)

(4-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

40.097

100

0.401
  degU Bacillus subtilis subsp. subtilis str. 168

34.685

100

0.372
  letA Legionella pneumophila str. Paris

35.714

100

0.362
  letA Legionella pneumophila strain ERS1305867

35.714

100

0.362