Detailed information NTG0174779

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: BS064_RS04765
• Genome accession: NZ_CP018254
• Coordinates: 1005745..1006749 (-)
• Length: 334 a.a.
• NCBI ID: WP_001154002.1
• Uniprot ID: A3M7W1
• Organism: Acinetobacter baumannii strain AF-401
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1000745..1011749

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BS064_RS04740 (BS064_04735)	tolA	1001007..1002410 (-)	1404	WP_001039152.1	cell envelope integrity protein TolA	-
BS064_RS04745 (BS064_04740)	tolR	1002414..1002866 (-)	453	WP_001007562.1	protein TolR	-
BS064_RS04750 (BS064_04745)	tolQ	1002866..1003564 (-)	699	WP_000224630.1	protein TolQ	-
BS064_RS04755 (BS064_04750)	ybgC	1003588..1003995 (-)	408	WP_001273591.1	tol-pal system-associated acyl-CoA thioesterase	-
BS064_RS04760 (BS064_04755)	-	1004206..1005540 (-)	1335	WP_000276833.1	M20 family metallopeptidase	-
BS064_RS04765 (BS064_04760)	ruvB	1005745..1006749 (-)	1005	WP_001154002.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
BS064_RS04770 (BS064_04765)	ruvA	1006758..1007357 (-)	600	WP_000578663.1	Holliday junction branch migration protein RuvA	-
BS064_RS04775 (BS064_04770)	-	1007449..1008789 (-)	1341	WP_000437078.1	deoxyguanosinetriphosphate triphosphohydrolase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36815.05 Da
• Isoelectric Point: 4.7936

>NTDB_id=174779 BS064_RS04765 WP_001154002.1 1005745..1006749(-) (ruvB) [Acinetobacter baumannii strain AF-401]
MQDRLISGTEKPEDHFDRAIRPTSLADYIGQPVVREQMEIFIGAARGRGEALDHTLIFGPPGLGKTTLANIIAREMGGNL
KSTSGPVLERAGDLAAMLTNLEEGDVLFIDEIHRLSPVIEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVAATTR
AGLLTSPLRDRFGIVQRLEFYSVEDLTHIVSRSANLMDVPITVEGAEEVARRSRGTPRIANRLLRRVRDYAQVKGTGEVN
HEMAQRALDMLNVDKAGLDTLDRRYLSMLLERFDGGPAGVEALAAAMAEDSGTLEDVIEPYLIQQGYVMRTARGRIATNQ
SYLQFGMTPPEPKN

Nucleotide

• Length: 1005 bp

>NTDB_id=174779 BS064_RS04765 WP_001154002.1 1005745..1006749(-) (ruvB) [Acinetobacter baumannii strain AF-401]
ATGCAAGACCGTCTAATCAGTGGAACAGAAAAACCTGAAGATCATTTTGATCGGGCTATTCGACCGACTTCACTTGCCGA
TTATATCGGGCAACCAGTCGTACGCGAGCAAATGGAAATTTTCATCGGTGCGGCTCGTGGTCGTGGTGAAGCACTCGATC
ACACACTGATTTTCGGTCCACCGGGCTTAGGAAAAACCACGCTTGCCAATATTATTGCGCGTGAAATGGGTGGCAATCTC
AAATCCACTTCAGGGCCTGTTTTAGAGCGTGCGGGTGATTTGGCTGCAATGCTGACTAACCTTGAAGAAGGCGATGTTTT
ATTTATTGATGAAATTCACCGTCTTTCACCAGTAATTGAAGAAATTCTGTATCCGGCAATGGAAGATTACCAACTCGATA
TCATGATTGGTGAAGGCCCTGCTGCTCGTTCAATTAAACTCGATTTACCACCTTTTACGCTCGTTGCTGCGACCACACGT
GCCGGCTTACTCACCTCGCCTCTACGTGACCGTTTCGGTATTGTGCAACGTCTTGAATTCTATTCTGTAGAAGACTTAAC
TCACATCGTCTCACGATCTGCAAACCTCATGGATGTACCCATTACAGTTGAGGGTGCAGAAGAAGTTGCACGCCGTTCAC
GCGGAACACCGCGTATTGCCAATCGTTTATTACGCCGTGTACGTGACTATGCACAAGTAAAAGGTACAGGCGAAGTTAAC
CATGAAATGGCACAACGTGCGCTTGATATGCTTAATGTAGATAAAGCTGGTTTAGATACCTTAGACCGACGTTATTTAAG
TATGTTGTTAGAACGTTTTGATGGTGGACCTGCTGGTGTTGAAGCCCTTGCAGCTGCTATGGCTGAAGATAGCGGAACAC
TTGAAGATGTTATTGAACCTTATTTAATTCAGCAAGGTTATGTTATGCGTACTGCACGAGGTCGCATTGCAACCAACCAA
TCTTATTTGCAGTTTGGCATGACGCCACCTGAGCCTAAAAACTAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-322)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

3D structure

• AlphaFold DB: A3M7W1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	57.704	99.102	0.572
ruvB	Synechocystis sp. PCC 6803	57.325	94.012	0.539
ruvB	Streptococcus pneumoniae TIGR4	56.113	95.509	0.536
ruvB	Streptococcus pneumoniae R6	56.113	95.509	0.536
ruvB	Streptococcus pneumoniae D39	56.113	95.509	0.536
ruvB	Helicobacter pylori 26695	54.934	91.018	0.5