Detailed information NTG0174553

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: BCBMB205_RS11785
• Genome accession: NZ_CP014838
• Coordinates: 2440198..2440635 (-)
• Length: 145 a.a.
• NCBI ID: WP_007612572.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CBMB205
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2435198..2445635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCBMB205_RS11735 (BCBMB205_23800)	sinI	2435581..2435754 (+)	174	WP_032874029.1	anti-repressor SinI	Regulator
BCBMB205_RS11740 (BCBMB205_23810)	sinR	2435788..2436123 (+)	336	WP_003153104.1	transcriptional regulator SinR	Regulator
BCBMB205_RS11745 (BCBMB205_23820)	tasA	2436171..2436956 (-)	786	WP_032874027.1	biofilm matrix protein TasA	-
BCBMB205_RS11750 (BCBMB205_23830)	sipW	2437021..2437605 (-)	585	WP_032874025.1	signal peptidase I SipW	-
BCBMB205_RS11755 (BCBMB205_23840)	tapA	2437577..2438248 (-)	672	WP_032874023.1	amyloid fiber anchoring/assembly protein TapA	-
BCBMB205_RS11760 (BCBMB205_23860)	-	2438507..2438836 (+)	330	WP_032874021.1	DUF3889 domain-containing protein	-
BCBMB205_RS11765 (BCBMB205_23870)	-	2438877..2439056 (-)	180	WP_022552966.1	YqzE family protein	-
BCBMB205_RS11770 (BCBMB205_23880)	comGG	2439113..2439490 (-)	378	WP_032874019.1	competence type IV pilus minor pilin ComGG	Machinery gene
BCBMB205_RS11775 (BCBMB205_23890)	comGF	2439491..2439991 (-)	501	WP_223204419.1	competence type IV pilus minor pilin ComGF	-
BCBMB205_RS11780 (BCBMB205_23900)	comGE	2439900..2440214 (-)	315	WP_032874016.1	competence type IV pilus minor pilin ComGE	Machinery gene
BCBMB205_RS11785 (BCBMB205_23910)	comGD	2440198..2440635 (-)	438	WP_007612572.1	competence type IV pilus minor pilin ComGD	Machinery gene
BCBMB205_RS11790 (BCBMB205_23920)	comGC	2440625..2440891 (-)	267	WP_042635730.1	competence type IV pilus major pilin ComGC	Machinery gene
BCBMB205_RS11795 (BCBMB205_23930)	comGB	2440938..2441975 (-)	1038	WP_032874014.1	competence type IV pilus assembly protein ComGB	Machinery gene
BCBMB205_RS11800 (BCBMB205_23940)	comGA	2441962..2443032 (-)	1071	WP_003153083.1	competence type IV pilus ATPase ComGA	Machinery gene
BCBMB205_RS11805 (BCBMB205_23950)	-	2443229..2444179 (-)	951	WP_032874012.1	magnesium transporter CorA family protein	-
BCBMB205_RS11810 (BCBMB205_23960)	-	2444325..2445626 (+)	1302	WP_032874010.1	hemolysin family protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16254.76 Da
• Isoelectric Point: 10.1850

>NTDB_id=174553 BCBMB205_RS11785 WP_007612572.1 2440198..2440635(-) (comGD) [Bacillus velezensis strain CBMB205]
MNNNRRTENGFTLLESLIVLSLASVLLTVLFTTVPPVCTHLAVRQKTEQLQKDIQLAQETAIAEHKRTKITFLPKEHKYK
LQSGGRIVERSFDSLHITLVTLPESLEFNEKGHPNSGGKIQLKSAGFTYEITVYLGSGNVHAKRK

Nucleotide

• Length: 438 bp

>NTDB_id=174553 BCBMB205_RS11785 WP_007612572.1 2440198..2440635(-) (comGD) [Bacillus velezensis strain CBMB205]
TTGAACAATAACAGGCGGACAGAAAATGGGTTTACCCTTCTTGAAAGCCTGATTGTGTTAAGCCTGGCGTCCGTCCTGCT
GACGGTTTTGTTCACGACGGTTCCGCCGGTCTGCACCCACCTTGCCGTGCGGCAAAAAACAGAACAGCTCCAAAAAGATA
TTCAGCTTGCTCAGGAAACGGCTATCGCAGAACATAAAAGAACAAAAATCACTTTTCTTCCAAAAGAGCATAAATACAAA
CTGCAGTCAGGCGGAAGGATTGTCGAGCGTTCTTTTGATTCGCTTCATATTACACTTGTAACTTTACCGGAGAGCCTTGA
ATTTAACGAAAAAGGCCATCCGAATTCGGGAGGAAAGATTCAATTGAAGAGCGCCGGGTTCACCTATGAGATAACAGTTT
ACTTAGGGAGCGGAAATGTCCATGCTAAACGGAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-31)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Bacillus subtilis subsp. subtilis str. 168	55.479	100	0.559