Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   A2G56_RS09770 Genome accession   NZ_CP014835
Coordinates   2134637..2135983 (+) Length   448 a.a.
NCBI ID   WP_062712138.1    Uniprot ID   -
Organism   Streptococcus halotolerans strain HTS9     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 2129637..2140983
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2G56_RS09745 - 2130698..2131348 (-) 651 WP_062712123.1 amino acid ABC transporter permease -
  A2G56_RS09750 - 2131357..2132055 (-) 699 WP_062712127.1 amino acid ABC transporter permease -
  A2G56_RS09755 - 2132075..2132902 (-) 828 WP_062712129.1 transporter substrate-binding domain-containing protein -
  A2G56_RS09760 - 2132919..2133701 (-) 783 WP_062712131.1 amino acid ABC transporter ATP-binding protein -
  A2G56_RS09765 vicR 2133937..2134644 (+) 708 WP_062712133.1 response regulator YycF Regulator
  A2G56_RS09770 vicK 2134637..2135983 (+) 1347 WP_062712138.1 cell wall metabolism sensor histidine kinase VicK Regulator
  A2G56_RS09775 vicX 2135985..2136794 (+) 810 WP_062712141.1 MBL fold metallo-hydrolase Regulator
  A2G56_RS09780 rnc 2136930..2137631 (+) 702 WP_099091487.1 ribonuclease III -

Sequence


Protein


Download         Length: 448 a.a.        Molecular weight: 51087.12 Da        Isoelectric Point: 4.6011

>NTDB_id=174505 A2G56_RS09770 WP_062712138.1 2134637..2135983(+) (vicK) [Streptococcus halotolerans strain HTS9]
MTDQFIFTFRDLIIAGLMSILVLIYVFLIINDSLNSRRVQQLTEQVQSLISGEYVVNQVTRGSAEVRTLAEHLNDLSEVF
RLTHENLGQEKNRLSSILSYMSDGVLATDRRGNIIMINDMARQQLNLSEEEDISVNIMTLLEETSYTYHDLITKTPEVTL
NRVDEFGEFTVLRINFALIKRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALKESV
APGFIRVSLDETNRMMRMISDLLSLSRIDNNNSHLEVELTNFTAFITYILNRFDQIKLQETQAGKSYDIIRNYPLVPVWI
EIDNDKMTQVIDNIINNAIKYSPDGGEITVSMRTTETQLIISISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTGLGL
AIAKEIIKQHNGFIWAKSDYGKGSTLTIVLPYEKNILEVDEEWEVTED

Nucleotide


Download         Length: 1347 bp        

>NTDB_id=174505 A2G56_RS09770 WP_062712138.1 2134637..2135983(+) (vicK) [Streptococcus halotolerans strain HTS9]
ATGACTGATCAATTTATTTTTACATTTAGAGATTTAATTATTGCAGGACTAATGTCTATCTTAGTCCTGATTTATGTTTT
TTTAATCATCAATGACTCGCTTAATAGCCGGCGAGTGCAGCAATTGACCGAGCAGGTTCAGTCATTGATTTCAGGTGAGT
ACGTTGTTAATCAAGTAACACGTGGTTCAGCAGAAGTTAGGACTTTGGCAGAACACCTCAATGATTTGTCGGAAGTGTTT
CGATTGACTCATGAGAATTTAGGGCAAGAAAAAAACCGGCTTTCTAGTATCTTGTCTTATATGAGTGATGGTGTTTTGGC
AACGGATCGGCGTGGTAATATCATCATGATTAATGACATGGCGAGACAGCAGTTAAACTTGTCAGAAGAAGAGGATATTT
CCGTCAATATTATGACCTTGTTGGAAGAGACTTCTTATACTTATCATGATTTGATCACGAAAACACCTGAGGTCACTCTC
AATCGAGTCGATGAGTTTGGTGAGTTTACTGTTTTAAGAATTAATTTTGCTTTGATTAAGCGAGAAAGTGGTTTTATTTC
AGGATTGGTTGCCGTTCTTCATGATACGACTGAACAGGAAAAAGAAGAACGCGAACGTCGCCTCTTTGTTTCGAATGTTA
GCCATGAACTACGAACTCCTTTAACATCAGTAAAATCCTACTTAGAAGCCCTTGATGAAGGTGCCCTAAAGGAATCGGTT
GCTCCTGGCTTTATACGTGTGTCTCTGGATGAGACTAACCGGATGATGCGAATGATTTCTGATTTGCTTTCCTTATCACG
AATTGATAATAATAACTCGCATTTAGAGGTTGAATTGACTAACTTTACAGCCTTTATAACTTACATCCTTAATCGTTTCG
ATCAGATCAAACTTCAGGAAACGCAAGCTGGCAAATCCTATGACATTATTCGAAATTATCCCTTGGTGCCTGTTTGGATT
GAGATTGATAATGACAAAATGACACAGGTTATTGATAATATTATCAATAATGCGATTAAGTATTCACCTGACGGTGGTGA
GATTACAGTTAGCATGCGAACAACTGAAACTCAGTTAATTATTTCGATTTCCGATCAAGGTTTGGGAATTCCAAAGAAAG
ATTTGCCACTTATTTTTGATCGATTTTATCGAGTCGACAAGGCTCGGAGCCGTGCACAAGGTGGCACTGGTCTTGGACTT
GCTATTGCCAAAGAGATTATTAAACAACATAATGGCTTTATTTGGGCCAAAAGTGACTACGGCAAGGGCTCAACCCTTAC
CATAGTATTACCGTATGAAAAGAATATTTTAGAAGTAGATGAAGAATGGGAGGTGACTGAAGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.019

91.741

0.661

  micB Streptococcus pneumoniae Cp1015

66.051

96.652

0.638


Multiple sequence alignment