Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   A2G56_RS09775 Genome accession   NZ_CP014835
Coordinates   2135985..2136794 (+) Length   269 a.a.
NCBI ID   WP_062712141.1    Uniprot ID   -
Organism   Streptococcus halotolerans strain HTS9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2130985..2141794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2G56_RS09750 - 2131357..2132055 (-) 699 WP_062712127.1 amino acid ABC transporter permease -
  A2G56_RS09755 - 2132075..2132902 (-) 828 WP_062712129.1 transporter substrate-binding domain-containing protein -
  A2G56_RS09760 - 2132919..2133701 (-) 783 WP_062712131.1 amino acid ABC transporter ATP-binding protein -
  A2G56_RS09765 vicR 2133937..2134644 (+) 708 WP_062712133.1 response regulator YycF Regulator
  A2G56_RS09770 vicK 2134637..2135983 (+) 1347 WP_062712138.1 cell wall metabolism sensor histidine kinase VicK Regulator
  A2G56_RS09775 vicX 2135985..2136794 (+) 810 WP_062712141.1 MBL fold metallo-hydrolase Regulator
  A2G56_RS09780 rnc 2136930..2137631 (+) 702 WP_099091487.1 ribonuclease III -
  A2G56_RS09785 smc 2137633..2141178 (+) 3546 WP_062712144.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30069.12 Da        Isoelectric Point: 6.1216

>NTDB_id=174506 A2G56_RS09775 WP_062712141.1 2135985..2136794(+) (vicX) [Streptococcus halotolerans strain HTS9]
MTDKGFKYSILASGSTGNAFYLETPKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGVLARKYHLD
VYANEKTWEVIDARNMIGKVDNSQKHVFSREKMMTFGDIDIESFGVSHDAVDPQFYRLMKDDKSFVMLTDTGYVSDRMAG
IVANADGYLIESNHDIDILRAGSYPWKTKQRILSDFGHLSNEAGAQAMIDTLGNRTKKIYLGHLSKENNIKELAHMTMES
NLMAADLGVNHDFKVLDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=174506 A2G56_RS09775 WP_062712141.1 2135985..2136794(+) (vicX) [Streptococcus halotolerans strain HTS9]
GTGACTGATAAAGGTTTTAAGTACAGTATTTTAGCTTCAGGGTCGACAGGTAATGCTTTTTATTTGGAGACACCAAAAAA
ACGTCTGTTGATTGATGCGGGACTGACTGGTAAGAAGATTACCAGTCTTTTAGCTGAAATTGATCGACGACCTGAAGATT
TAGATGCCATATTGATCACACACGAGCATTCCGACCACATCAAAGGTGTTGGCGTTTTGGCTCGTAAATACCATCTTGAT
GTGTATGCTAATGAAAAAACTTGGGAAGTGATAGATGCACGTAACATGATTGGTAAGGTTGATAACAGTCAAAAGCATGT
TTTTTCTCGGGAAAAAATGATGACTTTTGGAGATATTGATATCGAATCATTCGGTGTTAGCCATGATGCGGTTGACCCTC
AGTTTTATCGTTTGATGAAAGATGATAAAAGTTTTGTCATGTTAACTGACACGGGTTATGTTAGCGATCGCATGGCTGGG
ATTGTAGCTAATGCGGATGGCTACCTCATCGAATCCAATCACGACATTGACATCCTTAGAGCTGGTTCCTATCCATGGAA
AACCAAGCAACGGATTCTTTCTGATTTTGGACATTTATCCAATGAAGCAGGAGCTCAAGCGATGATTGATACTCTTGGCA
ATCGTACCAAGAAGATCTATTTGGGACACTTGAGTAAGGAAAATAATATCAAAGAATTAGCTCATATGACCATGGAATCT
AATCTCATGGCAGCTGACTTAGGGGTTAATCATGATTTTAAAGTATTGGATACATCGCCCGATACAGCAACGCCATTAAC
AGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

74.721

100

0.747

Multiple sequence alignment