Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   A0O21_RS07350 Genome accession   NZ_CP014699
Coordinates   1599418..1600455 (-) Length   345 a.a.
NCBI ID   WP_067063666.1    Uniprot ID   A0A172Q8R5
Organism   Streptococcus pantholopis strain TA 26     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1594418..1605455
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A0O21_RS07330 (A0O21_07330) nusG 1595828..1596367 (-) 540 WP_067063655.1 transcription termination/antitermination protein NusG -
  A0O21_RS10815 - 1596649..1596903 (-) 255 WP_158511701.1 hypothetical protein -
  A0O21_RS11020 - 1596876..1597151 (+) 276 Protein_1457 IS200/IS605 family transposase -
  A0O21_RS10935 - 1597346..1597498 (-) 153 WP_173644635.1 hypothetical protein -
  A0O21_RS07340 (A0O21_07340) trmB 1597922..1598560 (-) 639 WP_067063658.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  A0O21_RS07345 (A0O21_07345) ccrZ 1598560..1599351 (-) 792 WP_067063662.1 cell cycle regulator CcrZ -
  A0O21_RS07350 (A0O21_07350) pptB 1599418..1600455 (-) 1038 WP_067063666.1 ABC transporter permease Regulator
  A0O21_RS07355 (A0O21_07355) pptA 1600457..1601182 (-) 726 WP_067063669.1 ABC transporter ATP-binding protein Regulator
  A0O21_RS07360 (A0O21_07360) - 1601255..1601674 (+) 420 WP_067063672.1 HIT family protein -
  A0O21_RS07365 (A0O21_07365) - 1601671..1601967 (+) 297 WP_067063676.1 hypothetical protein -
  A0O21_RS07370 (A0O21_07370) brpA 1602422..1603579 (-) 1158 WP_067063680.1 biofilm formation/cell division transcriptional regulator BrpA -
  A0O21_RS07375 (A0O21_07375) - 1603590..1604111 (-) 522 WP_067063684.1 GNAT family N-acetyltransferase -
  A0O21_RS07380 (A0O21_07380) tsaE 1604086..1604547 (-) 462 WP_067063688.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 345 a.a.        Molecular weight: 40588.53 Da        Isoelectric Point: 10.5986

>NTDB_id=173365 A0O21_RS07350 WP_067063666.1 1599418..1600455(-) (pptB) [Streptococcus pantholopis strain TA 26]
MFRVFKDRRRRFLLQLLRYSRYVFNDHFVLVLLVLLGFLLVQYRNLLENFPQQPVFLFAALGAALFALLNSGSIATYLEP
ADRQFWLPKESELKMWILQAQKRSFLFGTLLQTLFLLLVTPVFLRQGFFLWHVALLAVLLAVLKWFLIGRKAHLFWNSAG
RLNWDAAIDYEKKRQQSLLKFFALFTRVKGLSGSVKRRRYLDGLLKFLKKEPAFLWENLYWRAFLRSSDYASLSLRLLLL
SILGLIFVDHPLVAASLALLFNYLLLFQLLALYYHFDYHYFTGLFPIDRQLKGQNLKRFLSCIAYLLLVIEMPFTLSWQG
AGLLAVVTVVTVEIYLPYKIRQMID

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=173365 A0O21_RS07350 WP_067063666.1 1599418..1600455(-) (pptB) [Streptococcus pantholopis strain TA 26]
ATGTTTCGGGTTTTTAAAGACCGTCGCAGGCGTTTTCTTTTACAGCTCCTGCGCTATTCAAGGTACGTTTTTAACGATCA
TTTTGTCTTAGTTTTATTGGTTTTGCTCGGTTTTCTCTTAGTTCAGTACAGAAACCTGCTGGAAAATTTTCCCCAACAGC
CAGTCTTTCTGTTTGCTGCTTTGGGAGCTGCTTTGTTTGCTCTCTTAAATTCTGGGTCAATCGCTACTTATTTAGAGCCT
GCCGACAGACAATTTTGGCTGCCTAAGGAAAGTGAGCTGAAGATGTGGATTCTTCAGGCCCAGAAGCGCTCTTTTCTTTT
TGGGACTTTGCTGCAGACTCTTTTTTTACTGCTTGTAACACCCGTTTTTTTAAGACAGGGCTTCTTTCTTTGGCATGTCG
CCTTGCTGGCAGTGCTGCTGGCTGTTTTGAAGTGGTTTTTAATTGGCCGTAAAGCCCATCTGTTTTGGAATTCTGCCGGC
CGTTTAAACTGGGACGCAGCAATTGATTATGAGAAGAAACGTCAGCAATCGCTTTTAAAGTTTTTTGCGCTCTTTACAAG
AGTTAAGGGTCTTTCAGGGAGTGTTAAGCGCCGCCGCTATTTAGACGGCTTATTGAAATTTCTAAAAAAAGAACCGGCAT
TTTTATGGGAAAATCTTTATTGGCGTGCTTTTCTGCGCAGTTCCGATTATGCCAGTTTATCGCTTCGTCTGCTGCTTTTG
AGCATTTTAGGCTTGATTTTTGTTGATCATCCGCTTGTAGCCGCAAGCTTGGCTCTGCTTTTTAACTATTTGCTGCTTTT
TCAGCTGCTGGCTTTATATTACCATTTTGACTATCACTATTTTACTGGTCTTTTCCCAATAGACAGACAGCTAAAAGGTC
AAAATTTAAAGCGCTTTTTAAGCTGCATCGCTTATTTGCTGCTGGTTATCGAAATGCCTTTCACCTTGTCCTGGCAGGGG
GCAGGTTTACTGGCTGTAGTGACTGTTGTCACTGTAGAAATTTACCTGCCGTATAAAATAAGGCAGATGATTGACTAA

Domains

Predicted by InterproScan.

Bacterial ABC transporter protein EcsB (EcsB)

(160-330)

Bacterial ABC transporter protein EcsB (EcsB)

(3-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A172Q8R5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.116

100

0.481
  pptB Streptococcus salivarius strain HSISS4

46.667

100

0.467

Multiple sequence alignment