Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   A0O21_RS07355 Genome accession   NZ_CP014699
Coordinates   1600457..1601182 (-) Length   241 a.a.
NCBI ID   WP_067063669.1    Uniprot ID   A0A172Q8T4
Organism   Streptococcus pantholopis strain TA 26     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1595457..1606182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A0O21_RS07330 (A0O21_07330) nusG 1595828..1596367 (-) 540 WP_067063655.1 transcription termination/antitermination protein NusG -
  A0O21_RS10815 - 1596649..1596903 (-) 255 WP_158511701.1 hypothetical protein -
  A0O21_RS11020 - 1596876..1597151 (+) 276 Protein_1457 IS200/IS605 family transposase -
  A0O21_RS10935 - 1597346..1597498 (-) 153 WP_173644635.1 hypothetical protein -
  A0O21_RS07340 (A0O21_07340) trmB 1597922..1598560 (-) 639 WP_067063658.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  A0O21_RS07345 (A0O21_07345) ccrZ 1598560..1599351 (-) 792 WP_067063662.1 cell cycle regulator CcrZ -
  A0O21_RS07350 (A0O21_07350) pptB 1599418..1600455 (-) 1038 WP_067063666.1 ABC transporter permease Regulator
  A0O21_RS07355 (A0O21_07355) pptA 1600457..1601182 (-) 726 WP_067063669.1 ABC transporter ATP-binding protein Regulator
  A0O21_RS07360 (A0O21_07360) - 1601255..1601674 (+) 420 WP_067063672.1 HIT family protein -
  A0O21_RS07365 (A0O21_07365) - 1601671..1601967 (+) 297 WP_067063676.1 hypothetical protein -
  A0O21_RS07370 (A0O21_07370) brpA 1602422..1603579 (-) 1158 WP_067063680.1 biofilm formation/cell division transcriptional regulator BrpA -
  A0O21_RS07375 (A0O21_07375) - 1603590..1604111 (-) 522 WP_067063684.1 GNAT family N-acetyltransferase -
  A0O21_RS07380 (A0O21_07380) tsaE 1604086..1604547 (-) 462 WP_067063688.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26814.15 Da        Isoelectric Point: 4.7777

>NTDB_id=173366 A0O21_RS07355 WP_067063669.1 1600457..1601182(-) (pptA) [Streptococcus pantholopis strain TA 26]
MLKIENLTGGYSRLPVLKDVSFSVKSGEVLGLIGLNGAGKSTTINEIIGLLTPFQGTISIDGMTLEQNQSAYRKKIGFIP
ETPVLYDELTLKEHFETMAMAYDIETSAALKRVQPYLELFRLDDKLDWFPAYFSKGMKQKVMIICAFLVDPELFIFDEPF
LGLDPLAIADLSDLLADEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEVRASGSLSELRRQFGDETASLNAIYMALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=173366 A0O21_RS07355 WP_067063669.1 1600457..1601182(-) (pptA) [Streptococcus pantholopis strain TA 26]
ATGTTAAAAATTGAGAACCTTACAGGCGGTTACAGCCGTCTTCCTGTTTTAAAAGATGTTTCTTTTTCGGTGAAATCCGG
TGAAGTGCTGGGGTTAATCGGTTTAAACGGCGCAGGAAAATCCACAACAATTAATGAGATTATCGGGCTTTTGACCCCTT
TTCAAGGAACAATAAGCATTGACGGGATGACTTTGGAGCAAAACCAGTCTGCCTACCGTAAAAAAATTGGTTTTATTCCC
GAAACGCCGGTTCTCTATGATGAGTTAACTTTGAAAGAGCATTTTGAAACAATGGCTATGGCTTATGATATTGAAACGAG
TGCAGCCTTAAAGCGGGTTCAGCCTTATTTGGAACTTTTTCGGTTAGATGATAAGCTGGATTGGTTTCCTGCCTATTTTT
CCAAGGGAATGAAGCAGAAAGTCATGATTATTTGTGCTTTTTTGGTTGATCCTGAATTATTTATTTTCGATGAACCTTTT
TTGGGGCTGGATCCTTTAGCAATAGCTGACCTAAGTGATCTGCTGGCCGACGAAAAAGCAAAAGGAAAATCGATTTTAAT
GAGTACACATGTCCTGGATTCTGCTGAAAAAATGTGCGACCGCTTTGTCATTTTACATAAGGGAGAGGTACGCGCTTCTG
GGAGCCTATCTGAGCTCCGCAGACAGTTTGGGGATGAAACAGCAAGCTTAAATGCTATTTATATGGCTTTGACAAAAGAG
GTGTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

71.548

99.17

0.71
  pptA Streptococcus thermophilus LMD-9

70.711

99.17

0.701

Multiple sequence alignment