Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   A0O21_RS02555 Genome accession   NZ_CP014699
Coordinates   529188..529997 (+) Length   269 a.a.
NCBI ID   WP_067060763.1    Uniprot ID   A0A172Q6A0
Organism   Streptococcus pantholopis strain TA 26     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 524188..534997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A0O21_RS02535 (A0O21_02545) - 525181..525990 (-) 810 WP_067060750.1 transporter substrate-binding domain-containing protein -
  A0O21_RS02540 (A0O21_02550) - 526002..526766 (-) 765 WP_067060753.1 amino acid ABC transporter ATP-binding protein -
  A0O21_RS02545 (A0O21_02555) vicR 527130..527840 (+) 711 WP_067060758.1 response regulator YycF Regulator
  A0O21_RS02550 (A0O21_02560) vicK 527833..529185 (+) 1353 WP_067060760.1 cell wall metabolism sensor histidine kinase VicK Regulator
  A0O21_RS02555 (A0O21_02565) vicX 529188..529997 (+) 810 WP_067060763.1 MBL fold metallo-hydrolase Regulator
  A0O21_RS02560 (A0O21_02570) rnc 530824..531510 (+) 687 WP_067060766.1 ribonuclease III -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30226.16 Da        Isoelectric Point: 6.2812

>NTDB_id=173343 A0O21_RS02555 WP_067060763.1 529188..529997(+) (vicX) [Streptococcus pantholopis strain TA 26]
MSESGFKYSILASGSSGNSFYLETDKKRLLVDAGLTGKKISSLLAEIDRKPEDLDAILITHEHSDHIKGVGVLARKYHLD
IYANEKTWQVIDEHQMIGQINQEQKHIFKRGSLMTFADLDVESFGVSHDAAEPQFYRFMKDNKSFVMLTDTGYVSDRLAG
LIENADAYLIESNHDIEILRSGSYPWRLKQRILSDKGHLSNDDGAQAMIRTIGRRTQKIYLGHLSKENNIKELAHMTMEN
SLLSADLGAGTDFKVFDTSPDTATPLTKI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=173343 A0O21_RS02555 WP_067060763.1 529188..529997(+) (vicX) [Streptococcus pantholopis strain TA 26]
ATGTCAGAAAGCGGATTTAAATACAGTATCTTAGCTTCAGGCTCGAGCGGCAATAGTTTTTATCTTGAAACAGACAAAAA
ACGTCTTTTAGTTGATGCCGGTCTAACCGGCAAAAAGATAAGCAGCCTATTGGCAGAAATTGACCGAAAACCGGAAGACC
TTGATGCTATTCTGATTACACATGAACATTCGGACCACATAAAAGGTGTGGGGGTCTTGGCTCGTAAGTATCATTTGGAT
ATTTATGCCAATGAGAAGACCTGGCAAGTAATAGATGAACATCAGATGATTGGTCAGATCAATCAGGAACAAAAACATAT
TTTTAAACGCGGAAGTCTGATGACATTTGCCGACCTTGACGTTGAAAGCTTCGGTGTCAGTCACGATGCGGCTGAACCCC
AGTTTTACCGTTTTATGAAAGATAATAAAAGCTTTGTAATGCTGACGGATACAGGCTATGTCAGTGATCGGCTGGCGGGA
TTGATTGAAAATGCAGATGCCTACCTGATTGAATCCAATCATGATATTGAAATTCTTCGGTCAGGCTCTTACCCATGGCG
GCTTAAGCAGCGTATTCTTTCAGATAAAGGTCATTTGTCCAATGATGATGGAGCTCAAGCTATGATTAGAACAATCGGCA
GAAGGACACAGAAGATTTATCTGGGCCATCTGAGCAAAGAAAACAATATCAAAGAATTAGCGCATATGACGATGGAAAAC
AGTCTGTTATCAGCTGATTTGGGGGCAGGTACTGACTTTAAGGTTTTTGATACTTCGCCTGATACCGCTACTCCTTTGAC
TAAAATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A172Q6A0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.465

100

0.755

Multiple sequence alignment