Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AC731_RS11445 | Genome accession | NZ_CP014646 |
| Coordinates | 2443364..2443855 (-) | Length | 163 a.a. |
| NCBI ID | WP_004258307.1 | Uniprot ID | A0A127K6E5 |
| Organism | Thauera humireducens strain SgZ-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2438364..2448855
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC731_RS11425 (AC731_011425) | - | 2439825..2440895 (-) | 1071 | WP_048710050.1 | efflux RND transporter periplasmic adaptor subunit | - |
| AC731_RS11430 (AC731_011430) | - | 2440970..2441359 (-) | 390 | WP_048706180.1 | sirohydrochlorin chelatase | - |
| AC731_RS11435 (AC731_011435) | - | 2441418..2442272 (-) | 855 | WP_048706183.1 | tRNA threonylcarbamoyladenosine dehydratase | - |
| AC731_RS11440 (AC731_011440) | - | 2442289..2443254 (-) | 966 | WP_048706185.1 | MBL fold metallo-hydrolase | - |
| AC731_RS11445 (AC731_011445) | ssb | 2443364..2443855 (-) | 492 | WP_004258307.1 | single-stranded DNA-binding protein | Machinery gene |
| AC731_RS11450 (AC731_011450) | - | 2443905..2445089 (-) | 1185 | WP_048706187.1 | MFS transporter | - |
| AC731_RS11455 (AC731_011455) | uvrA | 2445240..2448080 (+) | 2841 | WP_048706189.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17948.83 Da Isoelectric Point: 5.9576
>NTDB_id=172970 AC731_RS11445 WP_004258307.1 2443364..2443855(-) (ssb) [Thauera humireducens strain SgZ-1]
MASVNKVILIGNLGADPESRFAPSGDAICNIRLATTENWRDKNTGERREATEWHRVTFYGKLAEIAGQYLRKGSQVYIEG
SLRTRKWQDQSGQDRYTTEIRADEMKMLGRREGGDAPMRGNDGGYDAPAAAPRQQAPAAAPRPQSQPAPSSSGFGDFDDD
IPF
MASVNKVILIGNLGADPESRFAPSGDAICNIRLATTENWRDKNTGERREATEWHRVTFYGKLAEIAGQYLRKGSQVYIEG
SLRTRKWQDQSGQDRYTTEIRADEMKMLGRREGGDAPMRGNDGGYDAPAAAPRQQAPAAAPRPQSQPAPSSSGFGDFDDD
IPF
Nucleotide
Download Length: 492 bp
>NTDB_id=172970 AC731_RS11445 WP_004258307.1 2443364..2443855(-) (ssb) [Thauera humireducens strain SgZ-1]
ATGGCATCCGTCAACAAAGTCATCCTGATCGGCAACCTCGGCGCCGATCCCGAAAGCCGCTTCGCACCGTCCGGCGACGC
CATCTGCAACATCCGCCTGGCGACCACCGAGAACTGGCGCGACAAGAACACCGGCGAACGCCGCGAAGCCACCGAGTGGC
ATCGTGTGACGTTCTACGGCAAGCTCGCCGAGATCGCCGGCCAGTATCTGCGCAAGGGCAGCCAGGTCTACATCGAAGGT
AGCCTGCGCACCCGCAAGTGGCAGGACCAGAGCGGTCAGGATCGCTACACCACCGAGATCCGCGCCGACGAGATGAAGAT
GCTCGGCCGCCGCGAAGGCGGTGACGCGCCGATGCGCGGCAACGACGGCGGCTACGACGCTCCCGCAGCGGCCCCGCGCC
AGCAGGCTCCGGCTGCCGCGCCGCGTCCGCAGTCGCAGCCTGCGCCGTCCTCGTCTGGCTTCGGTGATTTCGACGACGAC
ATCCCGTTCTGA
ATGGCATCCGTCAACAAAGTCATCCTGATCGGCAACCTCGGCGCCGATCCCGAAAGCCGCTTCGCACCGTCCGGCGACGC
CATCTGCAACATCCGCCTGGCGACCACCGAGAACTGGCGCGACAAGAACACCGGCGAACGCCGCGAAGCCACCGAGTGGC
ATCGTGTGACGTTCTACGGCAAGCTCGCCGAGATCGCCGGCCAGTATCTGCGCAAGGGCAGCCAGGTCTACATCGAAGGT
AGCCTGCGCACCCGCAAGTGGCAGGACCAGAGCGGTCAGGATCGCTACACCACCGAGATCCGCGCCGACGAGATGAAGAT
GCTCGGCCGCCGCGAAGGCGGTGACGCGCCGATGCGCGGCAACGACGGCGGCTACGACGCTCCCGCAGCGGCCCCGCGCC
AGCAGGCTCCGGCTGCCGCGCCGCGTCCGCAGTCGCAGCCTGCGCCGTCCTCGTCTGGCTTCGGTGATTTCGACGACGAC
ATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
57.865 |
100 |
0.632 |
| ssb | Glaesserella parasuis strain SC1401 |
51.667 |
100 |
0.571 |
| ssb | Neisseria gonorrhoeae MS11 |
50.575 |
100 |
0.54 |
| ssb | Neisseria meningitidis MC58 |
50 |
100 |
0.534 |