Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AYJ57_RS02155 | Genome accession | NZ_CP014595 |
| Coordinates | 441905..442447 (+) | Length | 180 a.a. |
| NCBI ID | WP_066100550.1 | Uniprot ID | A0A1B1PL21 |
| Organism | Salipiger sp. CCB-MM3 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 436905..447447
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYJ57_RS02135 (AYJ57_02140) | - | 437007..437873 (+) | 867 | WP_066100541.1 | helix-turn-helix domain-containing protein | - |
| AYJ57_RS02140 (AYJ57_02145) | - | 437985..439655 (+) | 1671 | WP_066100543.1 | ABC transporter substrate-binding protein | - |
| AYJ57_RS02145 (AYJ57_02150) | - | 439680..440828 (-) | 1149 | WP_066100546.1 | cytochrome c peroxidase | - |
| AYJ57_RS02150 (AYJ57_02155) | - | 441067..441633 (-) | 567 | WP_066100548.1 | lytic transglycosylase domain-containing protein | - |
| AYJ57_RS02155 (AYJ57_02160) | ssb | 441905..442447 (+) | 543 | WP_066100550.1 | single-stranded DNA-binding protein | Machinery gene |
| AYJ57_RS02160 (AYJ57_02165) | - | 442793..444574 (+) | 1782 | WP_157373909.1 | hypothetical protein | - |
| AYJ57_RS02165 (AYJ57_02170) | - | 444717..446045 (+) | 1329 | WP_066100553.1 | HlyC/CorC family transporter | - |
| AYJ57_RS02170 (AYJ57_02175) | - | 446002..447168 (-) | 1167 | WP_066100555.1 | histidine kinase dimerization/phosphoacceptor domain -containing protein | - |
Sequence
Protein
Download Length: 180 a.a. Molecular weight: 18744.28 Da Isoelectric Point: 5.3335
>NTDB_id=172591 AYJ57_RS02155 WP_066100550.1 441905..442447(+) (ssb) [Salipiger sp. CCB-MM3]
MAGSVNKVILVGNLGADPEVRTFQNGGKVCNLRIATSENWKDRNTGERRERTEWHSVAIFSEPLARIAEQYLRKGSKVYI
EGQLETRKWQDQSGQDRYSTEVVLRPYRGELTLLDSRQGGGGGDFGGGSGGGYGGGSGGGYGGNDDGGYGGGSGGGYGGG
SGGGGGSRGPSRDIDDEIPF
MAGSVNKVILVGNLGADPEVRTFQNGGKVCNLRIATSENWKDRNTGERRERTEWHSVAIFSEPLARIAEQYLRKGSKVYI
EGQLETRKWQDQSGQDRYSTEVVLRPYRGELTLLDSRQGGGGGDFGGGSGGGYGGGSGGGYGGNDDGGYGGGSGGGYGGG
SGGGGGSRGPSRDIDDEIPF
Nucleotide
Download Length: 543 bp
>NTDB_id=172591 AYJ57_RS02155 WP_066100550.1 441905..442447(+) (ssb) [Salipiger sp. CCB-MM3]
ATGGCCGGCTCCGTCAACAAGGTGATCCTGGTAGGCAATCTCGGCGCGGACCCCGAGGTGCGCACCTTCCAGAACGGCGG
CAAGGTCTGCAACCTGCGCATCGCCACCTCCGAGAACTGGAAAGACCGCAACACCGGCGAGCGCCGCGAGCGCACCGAGT
GGCACTCGGTCGCGATCTTCTCGGAGCCGCTGGCGCGGATCGCCGAGCAATATCTGCGCAAGGGCTCGAAAGTTTACATC
GAAGGCCAGCTGGAAACCCGCAAATGGCAGGACCAGTCCGGTCAGGACCGCTACAGCACCGAAGTGGTGCTGCGCCCCTA
CCGCGGCGAGCTGACCCTGCTCGACAGCCGTCAGGGCGGCGGCGGCGGTGACTTCGGCGGCGGTTCGGGTGGCGGCTACG
GCGGCGGCTCGGGCGGTGGCTACGGTGGCAATGACGACGGCGGCTACGGTGGTGGCTCGGGCGGCGGCTACGGCGGCGGT
TCGGGCGGTGGCGGCGGCTCGCGCGGCCCGTCGCGCGACATCGACGACGAGATCCCGTTCTAA
ATGGCCGGCTCCGTCAACAAGGTGATCCTGGTAGGCAATCTCGGCGCGGACCCCGAGGTGCGCACCTTCCAGAACGGCGG
CAAGGTCTGCAACCTGCGCATCGCCACCTCCGAGAACTGGAAAGACCGCAACACCGGCGAGCGCCGCGAGCGCACCGAGT
GGCACTCGGTCGCGATCTTCTCGGAGCCGCTGGCGCGGATCGCCGAGCAATATCTGCGCAAGGGCTCGAAAGTTTACATC
GAAGGCCAGCTGGAAACCCGCAAATGGCAGGACCAGTCCGGTCAGGACCGCTACAGCACCGAAGTGGTGCTGCGCCCCTA
CCGCGGCGAGCTGACCCTGCTCGACAGCCGTCAGGGCGGCGGCGGCGGTGACTTCGGCGGCGGTTCGGGTGGCGGCTACG
GCGGCGGCTCGGGCGGTGGCTACGGTGGCAATGACGACGGCGGCTACGGTGGTGGCTCGGGCGGCGGCTACGGCGGCGGT
TCGGGCGGTGGCGGCGGCTCGCGCGGCCCGTCGCGCGACATCGACGACGAGATCCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
49.206 |
100 |
0.517 |
| ssb | Vibrio cholerae strain A1552 |
48.864 |
97.778 |
0.478 |
| ssb | Neisseria meningitidis MC58 |
40.437 |
100 |
0.411 |
| ssb | Neisseria gonorrhoeae MS11 |
38.462 |
100 |
0.389 |