Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | AZE33_RS18330 | Genome accession | NZ_CP014528 |
| Coordinates | 3798460..3798909 (-) | Length | 149 a.a. |
| NCBI ID | WP_020753494.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain XH858 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3793460..3803909
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AZE33_RS18305 (AZE33_18305) | - | 3793827..3794210 (+) | 384 | WP_000090000.1 | RidA family protein | - |
| AZE33_RS18310 (AZE33_18310) | - | 3794420..3794614 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| AZE33_RS18315 (AZE33_18315) | bfr | 3794859..3795323 (+) | 465 | WP_000678123.1 | heteropolymeric bacterioferritin subunit Bfr | - |
| AZE33_RS18320 (AZE33_18320) | - | 3795364..3796992 (-) | 1629 | WP_001195768.1 | PglL family O-oligosaccharyltransferase | - |
| AZE33_RS18325 (AZE33_18325) | - | 3797099..3798409 (-) | 1311 | WP_020753493.1 | O-antigen ligase family protein | - |
| AZE33_RS18330 (AZE33_18330) | pilA | 3798460..3798909 (-) | 450 | WP_020753494.1 | pilin | Machinery gene |
| AZE33_RS18335 (AZE33_18335) | - | 3799251..3799811 (-) | 561 | WP_020753495.1 | TPM domain-containing protein | - |
| AZE33_RS18340 (AZE33_18340) | - | 3799805..3800887 (-) | 1083 | WP_001246384.1 | TPM domain-containing protein | - |
| AZE33_RS18345 (AZE33_18345) | - | 3800909..3801499 (-) | 591 | WP_000846931.1 | LemA family protein | - |
| AZE33_RS18350 (AZE33_18350) | - | 3801631..3802518 (-) | 888 | WP_001017323.1 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15140.23 Da Isoelectric Point: 8.4527
>NTDB_id=172116 AZE33_RS18330 WP_020753494.1 3798460..3798909(-) (pilA) [Acinetobacter baumannii strain XH858]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQSYIAKSQASEAFTLADGLKTTIATNLQAGTCFANGSAAATATDSVTGKY
GKAEILADTTSGSNGCGIKYTFNASNVSAKLKNGVIGIAVSENGVLKKSTVTATTSTLNEYLPQSFSGS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQSYIAKSQASEAFTLADGLKTTIATNLQAGTCFANGSAAATATDSVTGKY
GKAEILADTTSGSNGCGIKYTFNASNVSAKLKNGVIGIAVSENGVLKKSTVTATTSTLNEYLPQSFSGS
Nucleotide
Download Length: 450 bp
>NTDB_id=172116 AZE33_RS18330 WP_020753494.1 3798460..3798909(-) (pilA) [Acinetobacter baumannii strain XH858]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAGTTATATTGCAAAATCTCAAGCTTCTGAAGCATTTACATTAGCAGATGGTCTAAAAACAACTATTG
CTACTAACTTGCAAGCTGGAACATGTTTCGCTAATGGTTCAGCTGCAGCAACAGCAACTGATTCAGTTACGGGTAAATAT
GGTAAAGCAGAAATTTTAGCAGATACAACGTCTGGTAGTAATGGATGTGGTATTAAATATACATTTAATGCATCAAATGT
ATCTGCTAAATTGAAAAACGGAGTTATTGGTATTGCTGTAAGTGAAAATGGTGTATTGAAGAAATCTACAGTAACAGCCA
CAACTTCTACATTAAATGAATATTTACCACAATCTTTCTCTGGTTCTTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAGTTATATTGCAAAATCTCAAGCTTCTGAAGCATTTACATTAGCAGATGGTCTAAAAACAACTATTG
CTACTAACTTGCAAGCTGGAACATGTTTCGCTAATGGTTCAGCTGCAGCAACAGCAACTGATTCAGTTACGGGTAAATAT
GGTAAAGCAGAAATTTTAGCAGATACAACGTCTGGTAGTAATGGATGTGGTATTAAATATACATTTAATGCATCAAATGT
ATCTGCTAAATTGAAAAACGGAGTTATTGGTATTGCTGTAAGTGAAAATGGTGTATTGAAGAAATCTACAGTAACAGCCA
CAACTTCTACATTAAATGAATATTTACCACAATCTTTCTCTGGTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter nosocomialis M2 |
67.785 |
100 |
0.678 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
40 |
100 |
0.403 |
| pilA | Vibrio cholerae strain A1552 |
40 |
100 |
0.403 |
| pilA | Vibrio cholerae C6706 |
40 |
100 |
0.403 |