Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | AYJ52_RS03145 | Genome accession | NZ_CP014477 |
| Coordinates | 668086..668559 (-) | Length | 157 a.a. |
| NCBI ID | WP_017387042.1 | Uniprot ID | A0A1C2TS07 |
| Organism | Acinetobacter pittii strain AP_882 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 663086..673559
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYJ52_RS03130 (AYJ52_03130) | pilX | 665725..666534 (-) | 810 | WP_005078460.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| AYJ52_RS03135 (AYJ52_03135) | pilW | 666531..667532 (-) | 1002 | WP_017387040.1 | PilW family protein | Machinery gene |
| AYJ52_RS03140 (AYJ52_03140) | pilV | 667532..668092 (-) | 561 | WP_079381023.1 | type IV pilus modification protein PilV | Machinery gene |
| AYJ52_RS03145 (AYJ52_03145) | fimU | 668086..668559 (-) | 474 | WP_017387042.1 | pilus assembly FimT family protein | Machinery gene |
| AYJ52_RS03150 (AYJ52_03150) | ispH | 668729..669679 (-) | 951 | WP_017387043.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| AYJ52_RS03155 (AYJ52_03155) | gmk | 669802..670431 (+) | 630 | WP_002116973.1 | guanylate kinase | - |
| AYJ52_RS03160 (AYJ52_03160) | rpoZ | 670504..670782 (+) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| AYJ52_RS20590 | - | 670821..670976 (+) | 156 | Protein_608 | hypothetical protein | - |
| AYJ52_RS03165 (AYJ52_03165) | spoT | 670992..673097 (+) | 2106 | WP_002116807.1 | RelA/SpoT family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16946.61 Da Isoelectric Point: 7.7942
>NTDB_id=171828 AYJ52_RS03145 WP_017387042.1 668086..668559(-) (fimU) [Acinetobacter pittii strain AP_882]
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSFELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSFELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=171828 AYJ52_RS03145 WP_017387042.1 668086..668559(-) (fimU) [Acinetobacter pittii strain AP_882]
ATGAGGGGAATTATTCCGCAAGATGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTTATGGCTATTATCGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGATTAGATGGAAACCAGCGAGATCTAATAAATACTTTAT
CGGAAGCAAAGAGCCAAGCCATACTTGGTCGACAAGACGTTTCTATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTTTTGAACTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCATTAAC
AGCGACGACTTTAACTTTTAATGCGAATGGGGTGATAACCAATATCACCCAAGATACACTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
ATGAGGGGAATTATTCCGCAAGATGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTTATGGCTATTATCGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGATTAGATGGAAACCAGCGAGATCTAATAAATACTTTAT
CGGAAGCAAAGAGCCAAGCCATACTTGGTCGACAAGACGTTTCTATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTTTTGAACTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCATTAAC
AGCGACGACTTTAACTTTTAATGCGAATGGGGTGATAACCAATATCACCCAAGATACACTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
87.898 |
100 |
0.879 |