Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AX764_RS00050 | Genome accession | NZ_CP014324 |
| Coordinates | 12145..12702 (+) | Length | 185 a.a. |
| NCBI ID | WP_071419607.1 | Uniprot ID | A0AAQ2ZDG9 |
| Organism | Oenococcus oeni strain UBOCC-A-315001 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 7145..17702
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AX764_RS09480 | - | 8835..9002 (+) | 168 | WP_158676592.1 | hypothetical protein | - |
| AX764_RS00035 (AX764_00035) | nadE | 9053..9880 (-) | 828 | WP_148124356.1 | ammonia-dependent NAD(+) synthetase | - |
| AX764_RS00040 (AX764_00040) | - | 10111..11577 (+) | 1467 | WP_071435553.1 | multicopper oxidase family protein | - |
| AX764_RS00045 (AX764_00045) | rpsF | 11696..12136 (+) | 441 | WP_002817809.1 | 30S ribosomal protein S6 | - |
| AX764_RS00050 (AX764_00050) | ssb | 12145..12702 (+) | 558 | WP_071419607.1 | single-stranded DNA-binding protein | Machinery gene |
| AX764_RS00055 (AX764_00055) | rpsR | 12725..13045 (+) | 321 | WP_002817487.1 | 30S ribosomal protein S18 | - |
| AX764_RS00060 (AX764_00060) | - | 13148..15205 (+) | 2058 | WP_002817488.1 | DHH family phosphoesterase | - |
| AX764_RS00065 (AX764_00065) | rplI | 15219..15674 (+) | 456 | WP_002817489.1 | 50S ribosomal protein L9 | - |
| AX764_RS00070 (AX764_00070) | dnaB | 15680..17137 (+) | 1458 | WP_148124357.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20189.79 Da Isoelectric Point: 4.5093
>NTDB_id=170333 AX764_RS00050 WP_071419607.1 12145..12702(+) (ssb) [Oenococcus oeni strain UBOCC-A-315001]
MINRVVLVGRLTRDVELRYTGNGDAVGSFTIAVERNFTNRAGEREADFISCVIWRKPAENFANFTGKGAMVGVEGRIQTR
TYDNNQGQKVYVTEVVVDNFQLLETRAQSEARRSQNGSAGNTGNTAPQSQSNFNIPNQQSNPFDSQFNNNASSASTNSQT
SSSSSPFNTDAGNDSLDISDDDLPF
MINRVVLVGRLTRDVELRYTGNGDAVGSFTIAVERNFTNRAGEREADFISCVIWRKPAENFANFTGKGAMVGVEGRIQTR
TYDNNQGQKVYVTEVVVDNFQLLETRAQSEARRSQNGSAGNTGNTAPQSQSNFNIPNQQSNPFDSQFNNNASSASTNSQT
SSSSSPFNTDAGNDSLDISDDDLPF
Nucleotide
Download Length: 558 bp
>NTDB_id=170333 AX764_RS00050 WP_071419607.1 12145..12702(+) (ssb) [Oenococcus oeni strain UBOCC-A-315001]
ATGATCAATCGAGTTGTATTAGTTGGTAGATTAACCCGCGACGTTGAGTTGCGTTATACAGGAAATGGTGATGCAGTTGG
ATCATTTACAATCGCTGTCGAACGAAATTTCACGAATCGCGCTGGTGAGCGCGAGGCTGATTTTATCAGTTGCGTGATTT
GGCGTAAACCTGCCGAAAACTTTGCCAATTTTACAGGTAAAGGAGCAATGGTTGGCGTCGAAGGCCGAATTCAGACCAGA
ACTTACGATAATAATCAGGGACAGAAGGTTTATGTGACCGAGGTTGTTGTTGATAATTTCCAATTATTGGAGACACGTGC
TCAATCTGAAGCGCGTCGTTCGCAAAATGGCAGTGCTGGGAACACGGGGAATACCGCTCCGCAAAGTCAGAGTAATTTCA
ATATTCCTAATCAACAGTCAAATCCATTTGATTCGCAATTCAACAATAATGCGAGTTCCGCTTCAACTAATAGTCAAACG
AGTTCTTCCAGCAGTCCTTTTAATACAGACGCCGGGAATGATTCGCTTGATATCTCGGATGATGATCTTCCGTTTTAA
ATGATCAATCGAGTTGTATTAGTTGGTAGATTAACCCGCGACGTTGAGTTGCGTTATACAGGAAATGGTGATGCAGTTGG
ATCATTTACAATCGCTGTCGAACGAAATTTCACGAATCGCGCTGGTGAGCGCGAGGCTGATTTTATCAGTTGCGTGATTT
GGCGTAAACCTGCCGAAAACTTTGCCAATTTTACAGGTAAAGGAGCAATGGTTGGCGTCGAAGGCCGAATTCAGACCAGA
ACTTACGATAATAATCAGGGACAGAAGGTTTATGTGACCGAGGTTGTTGTTGATAATTTCCAATTATTGGAGACACGTGC
TCAATCTGAAGCGCGTCGTTCGCAAAATGGCAGTGCTGGGAACACGGGGAATACCGCTCCGCAAAGTCAGAGTAATTTCA
ATATTCCTAATCAACAGTCAAATCCATTTGATTCGCAATTCAACAATAATGCGAGTTCCGCTTCAACTAATAGTCAAACG
AGTTCTTCCAGCAGTCCTTTTAATACAGACGCCGGGAATGATTCGCTTGATATCTCGGATGATGATCTTCCGTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
56.452 |
100 |
0.568 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
47.568 |
100 |
0.476 |